Basic Information
Locus ID:
gene.Thate08g16860
Species & Taxonomic ID:
Thalassia testudinum & 55497
Genome Assembly:
GCA_037157565.1
Description:
EIN3-binding F-box protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Chr08 | 335375769 | 335377798 | - | gene.Thate08g16860 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.31 | 65,387.52 Da | 47.56 | 98.84 | 0.09 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00646 | F-box domain | 54 | 95 | 6.0E-4 | IPR001810 |
| Pfam | PF13516 | Leucine Rich repeat | 510 | 531 | 0.9 | IPR001611 |
| Pfam | PF13516 | Leucine Rich repeat | 213 | 234 | 0.18 | IPR001611 |
| SUPERFAMILY | SSF81383 | F-box domain | 48 | 93 | 3.27E-8 | IPR036047 |
| SUPERFAMILY | SSF52047 | RNI-like | 147 | 413 | 4.45E-37 | - |
| SUPERFAMILY | SSF52047 | RNI-like | 398 | 603 | 1.22E-21 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 425 | 618 | 2.6E-21 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 264 | 420 | 1.0E-24 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 48 | 263 | 9.8E-33 | IPR032675 |
| SMART | SM00367 | LRR_CC_2 | 319 | 344 | 48.0 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 239 | 264 | 4.9E-5 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 560 | 585 | 190.0 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 161 | 186 | 12.0 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 508 | 533 | 0.026 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 371 | 396 | 23.0 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 345 | 370 | 2.8E-4 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 453 | 478 | 630.0 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 187 | 212 | 5.1E-5 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 534 | 558 | 410.0 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 213 | 238 | 3.4E-4 | IPR006553 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 33 | 53 | - | - |
Gene Ontology
Molecular Function:
KEGG Pathway
KO Term:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G25490.1 | EIN3-binding F box protein 1. Encodes an F-box protein involved in the ubiquitin/proteasome-dependent proteolysis of EIN3. | 0 |
| RefSeq | XP_022750277.1 | EIN3-binding F-box protein 1-like [Durio zibethinus] | 0 |
| Q9SKK0 | EIN3-binding F-box protein 1 OS=Arabidopsis thaliana OX=3702 GN=EBF1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A6P5ZCS1 | EIN3-binding F-box protein 1-like OS=Durio zibethinus OX=66656 GN=LOC111299377 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology