Basic Information
Locus ID:
gene.Thate08g14070
Species & Taxonomic ID:
Thalassia testudinum & 55497
Genome Assembly:
GCA_037157565.1
Description:
Calcium-dependent protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Chr08 | 315664639 | 315673090 | - | gene.Thate08g14070 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.99 | 60,385.40 Da | 40.76 | 82.50 | -0.46 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd05117 | STKc_CAMK | 59 | 317 | 2.42626E-138 | - |
| Pfam | PF13499 | EF-hand domain pair | 436 | 499 | 7.7E-15 | IPR002048 |
| Pfam | PF00069 | Protein kinase domain | 61 | 318 | 3.0E-74 | IPR000719 |
| Pfam | PF13499 | EF-hand domain pair | 365 | 425 | 3.2E-10 | IPR002048 |
| SUPERFAMILY | SSF47473 | EF-hand | 347 | 525 | 2.77E-44 | IPR011992 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 57 | 328 | 7.82E-87 | IPR011009 |
| Gene3D | G3DSA:1.10.238.10 | - | 327 | 501 | 6.4E-52 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 63 | 145 | 3.2E-28 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 146 | 326 | 7.3E-59 | - |
| SMART | SM00054 | efh_1 | 365 | 393 | 0.0049 | IPR002048 |
| SMART | SM00054 | efh_1 | 437 | 465 | 0.054 | IPR002048 |
| SMART | SM00054 | efh_1 | 473 | 501 | 4.3E-5 | IPR002048 |
| SMART | SM00220 | serkin_6 | 60 | 318 | 4.4E-97 | IPR000719 |
| SMART | SM00054 | efh_1 | 401 | 429 | 0.71 | IPR002048 |
| ProSiteProfiles | PS50222 | EF-hand calcium-binding domain profile. | 469 | 504 | 13.955498 | IPR002048 |
| ProSiteProfiles | PS50222 | EF-hand calcium-binding domain profile. | 361 | 396 | 13.871811 | IPR002048 |
| ProSiteProfiles | PS50222 | EF-hand calcium-binding domain profile. | 433 | 468 | 13.14653 | IPR002048 |
| ProSiteProfiles | PS50222 | EF-hand calcium-binding domain profile. | 397 | 432 | 10.97069 | IPR002048 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 60 | 318 | 48.979271 | IPR000719 |
| ProSitePatterns | PS00018 | EF-hand calcium-binding domain. | 410 | 422 | - | IPR018247 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 180 | 192 | - | IPR008271 |
| ProSitePatterns | PS00018 | EF-hand calcium-binding domain. | 482 | 494 | - | IPR018247 |
| ProSitePatterns | PS00018 | EF-hand calcium-binding domain. | 446 | 458 | - | IPR018247 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 66 | 89 | - | IPR017441 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 8 | 29 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 29 | - | - |
Gene Ontology
Biological Process:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G19450.1 | calcium-dependent protein kinase 19. calcium-dependent protein kinase (CDPK19) mRNA, complete | 0 |
| RefSeq | XP_039114830.1 | calcium-dependent protein kinase 20-like [Dioscorea cayenensis subsp. rotundata] | 0 |
| Q84SL0 | Calcium-dependent protein kinase 20 OS=Oryza sativa subsp. japonica OX=39947 GN=CPK20 PE=2 SV=2 | 0 | |
| TrEMBL | A0A6I9RC38 | calcium-dependent protein kinase 20 isoform X1 OS=Elaeis guineensis var. tenera OX=51953 GN=LOC105046526 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology