Basic Information
Locus ID:
gene.Thate08g12720
Species & Taxonomic ID:
Thalassia testudinum & 55497
Genome Assembly:
GCA_037157565.1
Description:
PWWP domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Chr08 | 303079577 | 303081613 | - | gene.Thate08g12720 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.61 | 75,248.68 Da | 51.44 | 52.55 | -1.00 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd05162 | PWWP | 117 | 194 | 1.57653E-22 | - |
| Pfam | PF00855 | PWWP domain | 116 | 201 | 5.6E-16 | IPR000313 |
| SUPERFAMILY | SSF63748 | Tudor/PWWP/MBT | 112 | 216 | 1.81E-22 | - |
| Gene3D | G3DSA:2.30.30.140 | - | 107 | 207 | 1.2E-22 | - |
| SMART | SM00293 | PWWP_4 | 114 | 175 | 2.6E-12 | IPR000313 |
| ProSiteProfiles | PS50812 | PWWP domain profile. | 116 | 177 | 16.020424 | IPR000313 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 104 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 491 | 511 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 403 | 417 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 17 | 63 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 556 | 581 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 641 | 672 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 607 | 640 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 541 | 587 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 375 | 466 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 375 | 395 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 607 | 678 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 486 | 523 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 306 | 330 | - | - |
| Coils | Coil | Coil | 17 | 86 | - | - |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G02950.1 | Tudor/PWWP/MBT superfamily protein. | 0 |
| RefSeq | XP_008805031.1 | uncharacterized protein LOC103718133 isoform X5 [Phoenix dactylifera] | 0 |
| Q9LYZ0 | PWWP domain-containing protein 5 OS=Arabidopsis thaliana OX=3702 GN=PDP5 PE=2 SV=1 | 0 | |
| TrEMBL | A0A8B7CRQ7 | uncharacterized protein LOC103718133 isoform X5 OS=Phoenix dactylifera OX=42345 GN=LOC103718133 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology