Basic Information
Locus ID:
gene.Thate08g10640
Species & Taxonomic ID:
Thalassia testudinum & 55497
Genome Assembly:
GCA_037157565.1
Description:
Homocysteine s-methyltransferase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Chr08 | 285893846 | 285975165 | - | gene.Thate08g10640 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.01 | 37,888.51 Da | 45.43 | 92.61 | -0.05 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF02574 | Homocysteine S-methyltransferase | 21 | 330 | 2.5E-75 | IPR003726 |
| SUPERFAMILY | SSF82282 | Homocysteine S-methyltransferase | 17 | 331 | 1.83E-82 | IPR036589 |
| Gene3D | G3DSA:3.20.20.330 | - | 9 | 329 | 6.1E-101 | IPR036589 |
| PIRSF | PIRSF037505 | BHMT | 2 | 111 | 2.7E-7 | IPR017226 |
| PIRSF | PIRSF037505 | BHMT | 293 | 343 | 0.44 | IPR017226 |
| ProSiteProfiles | PS50970 | Homocysteine-binding domain profile. | 8 | 330 | 46.241837 | IPR003726 |
Gene Ontology
Biological Process:
KEGG Pathway
Pathway:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G63250.1 | homocysteine methyltransferase 2. Encodes a homocysteine methyltransferase (HMT). Among the three HMT coding genes in the genome, HMT2 is responsible for a significant proportion of HMT activity in the flower stalks and silique hulls. However, HMT2 does not significantly contribute to the total HMT activity in seeds. | 0 |
| RefSeq | XP_010256139.1 | PREDICTED: homocysteine S-methyltransferase 2 [Nelumbo nucifera] | 0 |
| Q9M1W4 | Homocysteine S-methyltransferase 2 OS=Arabidopsis thaliana OX=3702 GN=HMT-2 PE=1 SV=1 | 0 | |
| TrEMBL | A0A1U7ZRP1 | homocysteine S-methyltransferase 2 OS=Nelumbo nucifera OX=4432 GN=LOC104596590 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology