Basic Information
Locus ID:
gene.Thate08g09710
Species & Taxonomic ID:
Thalassia testudinum & 55497
Genome Assembly:
GCA_037157565.1
Description:
Fizzy-related
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Chr08 | 273934756 | 273974701 | - | gene.Thate08g09710 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.23 | 51,311.42 Da | 58.67 | 77.79 | -0.34 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00400 | WD domain, G-beta repeat | 282 | 315 | 1.8E-6 | IPR001680 |
| Pfam | PF00400 | WD domain, G-beta repeat | 409 | 445 | 3.4E-5 | IPR001680 |
| SUPERFAMILY | SSF50978 | WD40 repeat-like | 162 | 446 | 7.51E-59 | IPR036322 |
| Gene3D | G3DSA:2.130.10.10 | - | 141 | 450 | 3.7E-119 | IPR015943 |
| SMART | SM00320 | WD40_4 | 148 | 189 | 78.0 | IPR001680 |
| SMART | SM00320 | WD40_4 | 235 | 272 | 0.0085 | IPR001680 |
| SMART | SM00320 | WD40_4 | 406 | 445 | 4.1E-9 | IPR001680 |
| SMART | SM00320 | WD40_4 | 362 | 403 | 390.0 | IPR001680 |
| SMART | SM00320 | WD40_4 | 276 | 315 | 1.2E-7 | IPR001680 |
| SMART | SM00320 | WD40_4 | 192 | 232 | 0.4 | IPR001680 |
| SMART | SM00320 | WD40_4 | 318 | 360 | 0.083 | IPR001680 |
| ProSiteProfiles | PS50082 | Trp-Asp (WD) repeats profile. | 200 | 241 | 9.271977 | IPR001680 |
| ProSiteProfiles | PS50294 | Trp-Asp (WD) repeats circular profile. | 413 | 446 | 12.235586 | - |
| ProSiteProfiles | PS50294 | Trp-Asp (WD) repeats circular profile. | 283 | 315 | 11.787407 | - |
| ProSiteProfiles | PS50082 | Trp-Asp (WD) repeats profile. | 283 | 324 | 14.752563 | IPR001680 |
| ProSiteProfiles | PS50082 | Trp-Asp (WD) repeats profile. | 413 | 446 | 14.819399 | IPR001680 |
| ProSitePatterns | PS00678 | Trp-Asp (WD) repeats signature. | 432 | 446 | - | IPR019775 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 6 | 31 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 44 | - | - |
Gene Ontology
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G22910.1 | FIZZY-related 2. | 0 |
| RefSeq | XP_020261787.1 | protein FIZZY-RELATED 2-like [Asparagus officinalis] | 0 |
| Q9M7I2 | B-type cell cycle switch protein ccs52A OS=Medicago truncatula OX=3880 GN=CCS52A PE=1 SV=1 | 0 | |
| TrEMBL | A0A5P1F3C8 | Protein FIZZY-RELATED 2 OS=Asparagus officinalis OX=4686 GN=A4U43_C04F24210 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology