Basic Information
Locus ID:
gene.Thate08g08970
Species & Taxonomic ID:
Thalassia testudinum & 55497
Genome Assembly:
GCA_037157565.1
Description:
belongs to the flavoprotein pyridine nucleotide cytochrome reductase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Chr08 | 254151494 | 254154202 | + | gene.Thate08g08970 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.61 | 19,244.89 Da | 41.83 | 80.17 | -0.24 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00175 | Oxidoreductase NAD-binding domain | 103 | 143 | 5.6E-5 | IPR001433 |
| SUPERFAMILY | SSF52343 | Ferredoxin reductase-like, C-terminal NADP-linked domain | 90 | 173 | 1.44E-19 | IPR039261 |
| Gene3D | G3DSA:3.40.50.80 | - | 91 | 147 | 4.1E-18 | IPR039261 |
| PRINTS | PR00371 | Flavoprotein pyridine nucleotide cytochrome reductase signature | 102 | 121 | 4.3E-12 | IPR001709 |
| PRINTS | PR00371 | Flavoprotein pyridine nucleotide cytochrome reductase signature | 131 | 140 | 4.3E-12 | IPR001709 |
Gene Ontology
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G30210.2 | P450 reductase 2. Encodes NADPH-cytochrome P450 reductase that catalyzes the first oxidative step of the phenylpropanoid general pathway. | 0 |
| RefSeq | XP_009385909.1 | PREDICTED: NADPH--cytochrome P450 reductase-like [Musa acuminata subsp. malaccensis] | 0 |
| Q653S9 | NADPH--cytochrome P450 reductase 3 OS=Oryza sativa subsp. japonica OX=39947 GN=CPR3 PE=1 SV=1 | 0 | |
| TrEMBL | A0A8T0QQG9 | CPR OS=Panicum virgatum OX=38727 GN=PVAP13_7KG415440 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Brassicaceae | Schrenkiella parvula | 1 | SpUn0657_0010.v2.2 |
| Hydrocharitaceae | Thalassia testudinum | 2 | gene.Thate02g14120, gene.Thate08g08970 |
| Poaceae | Lolium multiflorum | 1 | gene-QYE76_032376 |
| Poaceae | Puccinellia tenuiflora | 1 | Pt_Chr0402840 |
| Poaceae | Zea mays | 5 | Zm00001eb010260_P001, Zm00001eb040630_P001 ... |
| Salicaceae | Populus euphratica | 1 | populus_peu32170 |
| Solanaceae | Lycium barbarum | 1 | gene-LOC132604019 |