Basic Information
Locus ID:
gene.Thate08g05150
Species & Taxonomic ID:
Thalassia testudinum & 55497
Genome Assembly:
GCA_037157565.1
Description:
Proteinaceous RNase P 1, chloroplastic
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Chr08 | 124971122 | 124972686 | + | gene.Thate08g05150 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.09 | 52,410.35 Da | 61.32 | 66.06 | -0.64 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF17177 | Pentacotripeptide-repeat region of PRORP | 210 | 283 | 1.7E-20 | IPR033443 |
| Pfam | PF17177 | Pentacotripeptide-repeat region of PRORP | 166 | 203 | 1.3E-9 | IPR033443 |
| Pfam | PF16953 | Protein-only RNase P | 300 | 470 | 1.7E-47 | IPR031595 |
| Gene3D | G3DSA:1.25.40.10 | Tetratricopeptide repeat domain | 207 | 319 | 4.6E-24 | IPR011990 |
| Gene3D | G3DSA:3.40.50.11980 | - | 320 | 470 | 3.3E-56 | - |
| Gene3D | G3DSA:1.25.40.10 | Tetratricopeptide repeat domain | 83 | 205 | 7.8E-13 | IPR011990 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 111 | 144 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 24 | 44 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 83 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 46 | 64 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 23 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 113 | 134 | - | - |
Gene Ontology
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G32230.1 | proteinaceous RNase P 1. RNase P able to cleave tRNA-like structures involved in the maturation of plant mitochondrial mRNAs. | 0 |
| RefSeq | XP_038989250.1 | proteinaceous RNase P 1, chloroplastic/mitochondrial-like [Phoenix dactylifera] | 0 |
| Q66GI4 | Proteinaceous RNase P 1, chloroplastic/mitochondrial OS=Arabidopsis thaliana OX=3702 GN=PRORP1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A8B7BQK3 | ribonuclease P OS=Phoenix dactylifera OX=42345 GN=LOC103702617 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology