Basic Information
Locus ID:
gene.Thate08g01710
Species & Taxonomic ID:
Thalassia testudinum & 55497
Genome Assembly:
GCA_037157565.1
Description:
U-box domain-containing protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Chr08 | 17224205 | 17327813 | + | gene.Thate08g01710 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.71 | 100,558.75 Da | 49.46 | 80.89 | -0.50 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd16655 | RING-Ubox_WDSUB1_like | 829 | 869 | 8.52768E-23 | - |
| CDD | cd01989 | STK_N | 48 | 190 | 1.22428E-39 | - |
| CDD | cd14066 | STKc_IRAK | 543 | 789 | 1.4466E-83 | - |
| Pfam | PF04564 | U-box domain | 825 | 895 | 8.1E-22 | IPR003613 |
| Pfam | PF00069 | Protein kinase domain | 537 | 789 | 4.1E-45 | IPR000719 |
| SUPERFAMILY | SSF52402 | Adenine nucleotide alpha hydrolases-like | 55 | 153 | 1.0E-5 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 511 | 791 | 8.09E-70 | IPR011009 |
| SUPERFAMILY | SSF57850 | RING/U-box | 823 | 895 | 8.21E-26 | - |
| Gene3D | G3DSA:3.40.50.620 | HUPs | 23 | 154 | 3.2E-8 | IPR014729 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 506 | 609 | 1.9E-28 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 610 | 804 | 6.9E-49 | - |
| Gene3D | G3DSA:3.30.40.10 | Zinc/RING finger domain, C3HC4 (zinc finger) | 824 | 897 | 2.3E-30 | IPR013083 |
| SMART | SM00504 | Ubox_2 | 828 | 890 | 2.3E-28 | IPR003613 |
| SMART | SM00220 | serkin_6 | 537 | 803 | 3.0E-36 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 537 | 807 | 36.046661 | IPR000719 |
| ProSiteProfiles | PS51698 | U-box domain profile. | 824 | 897 | 35.048428 | IPR003613 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 543 | 564 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 655 | 667 | - | IPR008271 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 204 | 268 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 297 | 319 | - | - |
| Coils | Coil | Coil | 474 | 515 | - | - |
| Coils | Coil | Coil | 414 | 469 | - | - |
| Coils | Coil | Coil | 323 | 406 | - | - |
Gene Ontology
Biological Process:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G45910.1 | U-box domain-containing protein kinase family protein. | 0 |
| RefSeq | XP_008804030.2 | U-box domain-containing protein 33-like [Phoenix dactylifera] | 0 |
| Q8GUH1 | U-box domain-containing protein 33 OS=Arabidopsis thaliana OX=3702 GN=PUB33 PE=2 SV=2 | 0 | |
| TrEMBL | A0A8B7CQB5 | U-box domain-containing protein 33-like OS=Phoenix dactylifera OX=42345 GN=LOC103717427 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology