Basic Information
Locus ID:
gene.Thate08g00720
Species & Taxonomic ID:
Thalassia testudinum & 55497
Genome Assembly:
GCA_037157565.1
Description:
Belongs to the protein kinase superfamily. Ser Thr protein kinase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Chr08 | 6564356 | 6570617 | - | gene.Thate08g00720 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.83 | 108,395.23 Da | 31.00 | 103.20 | 0.02 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF13855 | Leucine rich repeat | 531 | 590 | 2.8E-8 | IPR001611 |
| Pfam | PF00069 | Protein kinase domain | 697 | 904 | 4.3E-43 | IPR000719 |
| Pfam | PF00560 | Leucine Rich Repeat | 291 | 308 | 0.28 | IPR001611 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 26 | 72 | 2.0E-8 | IPR013210 |
| SUPERFAMILY | SSF52047 | RNI-like | 79 | 399 | 1.41E-59 | - |
| SUPERFAMILY | SSF52058 | L domain-like | 313 | 621 | 3.4E-57 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 690 | 976 | 1.16E-67 | IPR011009 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 334 | 626 | 1.2E-77 | IPR032675 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 695 | 779 | 5.7E-15 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 235 | 333 | 1.9E-29 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 26 | 142 | 4.9E-27 | IPR032675 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 780 | 990 | 3.2E-57 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 143 | 234 | 1.7E-22 | IPR032675 |
| SMART | SM00369 | LRR_typ_2 | 121 | 145 | 18.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 505 | 529 | 270.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 337 | 361 | 57.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 98 | 120 | 4.8 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 193 | 217 | 110.0 | IPR003591 |
| SMART | SM00220 | serkin_6 | 696 | 976 | 2.2E-34 | IPR000719 |
| SMART | SM00369 | LRR_typ_2 | 289 | 313 | 25.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 553 | 577 | 19.0 | IPR003591 |
| ProSiteProfiles | PS51450 | Leucine-rich repeat profile. | 100 | 122 | 7.858268 | IPR001611 |
| ProSiteProfiles | PS51450 | Leucine-rich repeat profile. | 291 | 313 | 7.388525 | IPR001611 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 696 | 983 | 37.417656 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 702 | 726 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 823 | 835 | - | IPR008271 |
| PRINTS | PR00019 | Leucine-rich repeat signature | 553 | 566 | 1.4E-5 | - |
| PRINTS | PR00019 | Leucine-rich repeat signature | 508 | 521 | 1.4E-5 | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G28650.1 | Leucine-rich repeat transmembrane protein kinase family protein. | 0 |
| RefSeq | XP_002465865.1 | MDIS1-interacting receptor like kinase 1 [Sorghum bicolor] | 0 |
| Q9M0G7 | MDIS1-interacting receptor like kinase 1 OS=Arabidopsis thaliana OX=3702 GN=MIK1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A833QXX8 | Leucine-rich repeat receptor-like protein kinase PXL2-like protein OS=Carex littledalei OX=544730 GN=FCM35_KLT06763 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology