Basic Information
Locus ID:
gene.Thate07g19560
Species & Taxonomic ID:
Thalassia testudinum & 55497
Genome Assembly:
GCA_037157565.1
Description:
LRR receptor-like serine threonine-protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Chr07 | 414272982 | 414382449 | - | gene.Thate07g19560 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.95 | 111,311.43 Da | 33.37 | 94.89 | -0.19 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 692 | 954 | 6.5472E-99 | - |
| Pfam | PF13855 | Leucine rich repeat | 295 | 354 | 2.6E-7 | IPR001611 |
| Pfam | PF11721 | Malectin domain | 430 | 612 | 4.2E-38 | IPR021720 |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 687 | 953 | 1.0E-46 | IPR001245 |
| Pfam | PF13855 | Leucine rich repeat | 200 | 258 | 3.7E-9 | IPR001611 |
| Pfam | PF13855 | Leucine rich repeat | 128 | 186 | 2.7E-6 | IPR001611 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 668 | 968 | 8.75E-80 | IPR011009 |
| SUPERFAMILY | SSF52047 | RNI-like | 104 | 414 | 1.41E-60 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 285 | 428 | 1.2E-24 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 44 | 284 | 8.5E-58 | IPR032675 |
| Gene3D | G3DSA:2.60.120.430 | - | 429 | 617 | 1.4E-31 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 660 | 761 | 5.5E-34 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 762 | 966 | 8.8E-59 | - |
| SMART | SM00369 | LRR_typ_2 | 174 | 197 | 46.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 126 | 149 | 110.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 198 | 221 | 13.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 317 | 341 | 13.0 | IPR003591 |
| SMART | SM00220 | serkin_6 | 686 | 954 | 9.4E-29 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 686 | 959 | 36.188 | IPR000719 |
| ProSiteProfiles | PS51450 | Leucine-rich repeat profile. | 319 | 341 | 7.21141 | IPR001611 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 806 | 818 | - | IPR008271 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G56140.1 | Leucine-rich repeat transmembrane protein kinase. | 0 |
| RefSeq | XP_042510118.1 | probable LRR receptor-like serine/threonine-protein kinase At1g56140 isoform X1 [Macadamia integrifolia] | 0 |
| C0LGH3 | Probable LRR receptor-like serine/threonine-protein kinase At1g56140 OS=Arabidopsis thaliana OX=3702 GN=At1g56140 PE=2 SV=2 | 0 | |
| TrEMBL | A0A835RZV0 | Protein kinase domain-containing protein OS=Vanilla planifolia OX=51239 GN=HPP92_005591 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology