Basic Information
Locus ID:
gene.Thate07g19550
Species & Taxonomic ID:
Thalassia testudinum & 55497
Genome Assembly:
GCA_037157565.1
Description:
LRR receptor-like serine threonine-protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Chr07 | 413843090 | 413976898 | - | gene.Thate07g19550 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.74 | 111,861.70 Da | 33.62 | 92.97 | -0.22 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 695 | 957 | 7.27905E-96 | - |
| Pfam | PF13855 | Leucine rich repeat | 203 | 261 | 9.4E-7 | IPR001611 |
| Pfam | PF13855 | Leucine rich repeat | 298 | 357 | 2.0E-6 | IPR001611 |
| Pfam | PF11721 | Malectin domain | 433 | 615 | 2.2E-39 | IPR021720 |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 691 | 955 | 7.9E-46 | IPR001245 |
| SUPERFAMILY | SSF52058 | L domain-like | 102 | 417 | 1.43E-56 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 671 | 966 | 2.73E-79 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 765 | 967 | 3.1E-58 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 655 | 764 | 6.0E-33 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 250 | 432 | 6.3E-36 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 67 | 175 | 7.1E-19 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 176 | 249 | 2.0E-21 | IPR032675 |
| Gene3D | G3DSA:2.60.120.430 | - | 433 | 620 | 3.7E-31 | - |
| SMART | SM00220 | serkin_6 | 689 | 957 | 1.5E-27 | IPR000719 |
| ProSiteProfiles | PS51450 | Leucine-rich repeat profile. | 322 | 344 | 7.249913 | IPR001611 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 689 | 962 | 35.891186 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 809 | 821 | - | IPR008271 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 982 | 1007 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G56140.1 | Leucine-rich repeat transmembrane protein kinase. | 0 |
| RefSeq | XP_016581541.1 | probable LRR receptor-like serine/threonine-protein kinase At1g56140 isoform X1 [Capsicum annuum] | 0 |
| C0LGH3 | Probable LRR receptor-like serine/threonine-protein kinase At1g56140 OS=Arabidopsis thaliana OX=3702 GN=At1g56140 PE=2 SV=2 | 0 | |
| TrEMBL | A0A2G2WFQ3 | Putative LRR receptor-like serine/threonine-protein kinase OS=Capsicum baccatum OX=33114 GN=CQW23_18103 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology