Basic Information
Locus ID:
gene.Thate07g18730
Species & Taxonomic ID:
Thalassia testudinum & 55497
Genome Assembly:
GCA_037157565.1
Description:
Belongs to the NPH3 family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Chr07 | 402086993 | 402090709 | - | gene.Thate07g18730 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.20 | 71,551.80 Da | 49.45 | 94.32 | -0.21 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd18312 | BTB_POZ_NPY3-like | 20 | 124 | 1.55111E-45 | - |
| Pfam | PF03000 | NPH3 family | 214 | 480 | 7.9E-93 | IPR027356 |
| Pfam | PF00651 | BTB/POZ domain | 24 | 115 | 3.2E-8 | IPR000210 |
| SUPERFAMILY | SSF54695 | POZ domain | 20 | 116 | 6.67E-18 | IPR011333 |
| Gene3D | G3DSA:3.30.710.10 | Potassium Channel Kv1.1; Chain A | 17 | 170 | 1.5E-14 | IPR011333 |
| SMART | SM00225 | BTB_4 | 28 | 129 | 3.9E-4 | IPR000210 |
| ProSiteProfiles | PS50097 | BTB domain profile. | 28 | 99 | 11.047234 | IPR000210 |
| ProSiteProfiles | PS51649 | NPH3 domain profile. | 214 | 504 | 91.041313 | IPR027356 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 613 | 631 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 613 | 641 | - | - |
| Coils | Coil | Coil | 546 | 580 | - | - |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G30440.1 | Phototropic-responsive NPH3 family protein. | 0 |
| RefSeq | XP_010923667.1 | BTB/POZ domain-containing protein At1g30440 [Elaeis guineensis] | 0 |
| Q9S9Q9 | BTB/POZ domain-containing protein At1g30440 OS=Arabidopsis thaliana OX=3702 GN=At1g30440 PE=1 SV=2 | 0 | |
| TrEMBL | A0A6I9RCI9 | BTB/POZ domain-containing protein At1g30440 OS=Elaeis guineensis var. tenera OX=51953 GN=LOC105046702 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology