Basic Information
Locus ID:
gene.Thate07g18130
Species & Taxonomic ID:
Thalassia testudinum & 55497
Genome Assembly:
GCA_037157565.1
Description:
Leucine rich repeat N-terminal domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Chr07 | 396788722 | 396824950 | + | gene.Thate07g18130 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.56 | 74,722.47 Da | 40.28 | 93.15 | -0.14 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 33 | 72 | 3.6E-11 | IPR013210 |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 392 | 642 | 1.8E-21 | IPR001245 |
| Pfam | PF13855 | Leucine rich repeat | 99 | 159 | 2.1E-9 | IPR001611 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 369 | 641 | 6.73E-38 | IPR011009 |
| SUPERFAMILY | SSF52058 | L domain-like | 33 | 175 | 1.97E-26 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 353 | 461 | 3.2E-15 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 33 | 217 | 8.3E-35 | IPR032675 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 462 | 649 | 6.7E-29 | - |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 379 | 657 | 15.524093 | IPR000719 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 270 | 303 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G45840.2 | Leucine-rich repeat protein kinase family protein. | 0 |
| RefSeq | XP_008789989.3 | protein MALE DISCOVERER 2-like isoform X1 [Phoenix dactylifera] | 0 |
| C0LGU7 | Protein MALE DISCOVERER 1 OS=Arabidopsis thaliana OX=3702 GN=MDIS1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A8B7C1Z5 | protein MALE DISCOVERER 2-like isoform X1 OS=Phoenix dactylifera OX=42345 GN=LOC103707329 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology