Basic Information
Locus ID:
gene.Thate07g18080
Species & Taxonomic ID:
Thalassia testudinum & 55497
Genome Assembly:
GCA_037157565.1
Description:
F-box LRR-repeat MAX2 homolog
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Chr07 | 395965964 | 395968120 | - | gene.Thate07g18080 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.30 | 79,636.60 Da | 58.01 | 97.67 | -0.12 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF18511 | F-box | 28 | 65 | 5.4E-10 | IPR041567 |
| SUPERFAMILY | SSF52047 | RNI-like | 163 | 420 | 3.14E-13 | - |
| SUPERFAMILY | SSF81383 | F-box domain | 20 | 77 | 7.33E-8 | IPR036047 |
| Gene3D | G3DSA:1.20.1280.50 | - | 24 | 64 | 6.6E-12 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 158 | 448 | 8.4E-23 | IPR032675 |
| SMART | SM00256 | fbox_2 | 28 | 69 | 0.0019 | IPR001810 |
| SMART | SM00367 | LRR_CC_2 | 350 | 375 | 12.0 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 376 | 401 | 0.1 | IPR006553 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 21 | - | - |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G42620.1 | RNI-like superfamily protein. The mutations at MAX2 cause increased hypocotyl and petiole elongation in light-grown seedlings. Positional cloning identifies MAX2 as a member of the F-box leucine-rich repeat family of proteins. MAX2 is identical to ORE9, a proposed regulator of leaf senescence. Involved in positive regulation of light responses. | 0 |
| RefSeq | XP_008812067.1 | F-box protein MAX2-like [Phoenix dactylifera] | 0 |
| I1SSI6 | F-box protein MAX2 homolog B OS=Petunia hybrida OX=4102 GN=MAX2B PE=1 SV=1 | 0 | |
| TrEMBL | A0A8B7D382 | F-box protein MAX2-like OS=Phoenix dactylifera OX=42345 GN=LOC103723052 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Acanthaceae | Avicennia marina | 2 | jg19300, jg24374 |
| Aizoaceae | Mesembryanthemum crystallinum | 1 | gene_25987 |
| Amaranthaceae | Atriplex hortensis | 1 | Ah011764 |
| Amaranthaceae | Beta vulgaris | 1 | BVRB_9g209910 |
| Amaranthaceae | Salicornia bigelovii | 2 | Sbi_jg12036, Sbi_jg46957 |
| Amaranthaceae | Salicornia europaea | 1 | Seu_jg21250 |
| Amaranthaceae | Suaeda aralocaspica | 1 | GOSA_00009589 |
| Amaranthaceae | Suaeda glauca | 2 | Sgl80440, Sgl82901 |
| Amaranthaceae | Chenopodium album | 4 | gene:ENSEOMG00000005004, gene:ENSEOMG00000039045 ... |
| Amaranthaceae | Chenopodium quinoa | 1 | CQ.Regalona.r1.7BG0019970 |
| Apiaceae | Apium graveolens | 1 | Ag11G03435 |
| Arecaceae | Cocos nucifera | 2 | COCNU_02G002530, COCNU_06G005670 |
| Arecaceae | Phoenix dactylifera | 3 | gene-LOC103706894, gene-LOC103723039, gene-LOC103723052 |
| Asparagaceae | Asparagus officinalis | 1 | AsparagusV1_06.1303.V1.1 |
| Asteraceae | Flaveria trinervia | 1 | Ftri11G24605 |
| Brassicaceae | Arabidopsis thaliana | 1 | AT2G42620.1 |
| Brassicaceae | Eutrema salsugineum | 1 | Thhalv10017925m.g.v1.0 |
| Brassicaceae | Schrenkiella parvula | 1 | Sp4g24760.v2.2 |
| Brassicaceae | Brassica nigra | 2 | BniB01g003320.2N, BniB06g001650.2N |
| Casuarinaceae | Casuarina equisetifolia | 2 | Ceq02G1285, Ceq02G2863 |
| Casuarinaceae | Casuarina glauca | 4 | Cgl02G1323, Cgl02G1326, Cgl02G1328, Cgl02G2978 |
| Cymodoceaceae | Cymodocea nodosa | 2 | gene.Cymno02g16310, gene.Cymno09g01880 |
| Hydrocharitaceae | Thalassia testudinum | 1 | gene.Thate07g18080 |
| Malvaceae | Hibiscus hamabo Siebold & Zucc. | 4 | nbisL1-mrna-3436, nbisL1-mrna-3437, nbisL1-mrna-6791 ... |
| Nitrariaceae | Nitraria sibirica | 2 | evm.TU.LG04.1707, evm.TU.LG12.819 |
| Plantaginaceae | Plantago ovata | 1 | Pov_00004636 |
| Poaceae | Echinochloa crus-galli | 3 | AH06.290, BH06.400, CH06.390 |
| Poaceae | Eleusine coracana subsp. coracana | 2 | gene-QOZ80_6AG0509320, gene-QOZ80_6BG0461450 |
| Poaceae | Hordeum vulgare | 1 | HORVU.MOREX.r3.7HG0652790.1.CDS1 |
| Poaceae | Lolium multiflorum | 1 | gene-QYE76_027969 |
| Poaceae | Oryza coarctata | 2 | Oco11G002580, Oco12G002580 |
| Poaceae | Oryza sativa | 1 | LOC_Os06g06050.1 |
| Poaceae | Paspalum vaginatum | 1 | gene-BS78_10G046500 |
| Poaceae | Puccinellia tenuiflora | 1 | Pt_Chr0402159 |
| Poaceae | Sporobolus alterniflorus | 4 | Chr0G015440, Chr11G022700, Chr14G001990, Chr21G001100 |
| Poaceae | Thinopyrum elongatum | 1 | Tel7E01G221800 |
| Poaceae | Triticum dicoccoides | 2 | gene_TRIDC7AG012870, gene_TRIDC7BG001090 |
| Poaceae | Triticum aestivum | 3 | TraesCS7A02G110500.1.cds1, TraesCS7B02G008400.1.cds1 ... |
| Poaceae | Zea mays | 2 | Zm00001eb270950_P001, Zm00001eb376660_P001 |
| Poaceae | Zoysia japonica | 1 | nbis-gene-34743 |
| Poaceae | Zoysia macrostachya | 1 | Zma_g31373 |
| Portulacaceae | Portulaca oleracea | 2 | evm.TU.LG02.2151, evm.TU.LG23.387 |
| Posidoniaceae | Posidonia oceanica | 3 | gene.Posoc01g28200, gene.Posoc08g03100, gene.Posoc08g10080 |
| Rhizophoraceae | Bruguiera sexangula | 1 | evm.TU.Scaffold_9_RagTag.1157 |
| Rhizophoraceae | Carallia pectinifolia | 3 | nbisL1-mrna-11740, nbisL1-mrna-21015, nbisL1-mrna-30776 |
| Rhizophoraceae | Ceriops tagal | 2 | nbisL1-mrna-15208, nbisL1-mrna-8623 |
| Rhizophoraceae | Ceriops zippeliana | 2 | nbisL1-mrna-11185, nbisL1-mrna-18663 |
| Rhizophoraceae | Kandelia candel | 2 | add.evm.TU.utg000003l.268, add.evm.TU.utg000006l.289 |
| Rhizophoraceae | Kandelia obovata | 1 | Maker00009550 |
| Rhizophoraceae | Rhizophora apiculata | 1 | nbisL1-mrna-17251 |
| Rhizophoraceae | Rhizophora mangle | 1 | nbisL1-mrna-4907 |
| Salicaceae | Populus euphratica | 2 | populus_peu18049, populus_peu27121 |
| Solanaceae | Lycium barbarum | 1 | gene-LOC132636581 |
| Solanaceae | Solanum chilense | 2 | SOLCI002808700, SOLCI003719600 |
| Solanaceae | Solanum pennellii | 2 | gene-LOC107007259, gene-LOC107026050 |
| Tamaricaceae | Reaumuria soongarica | 2 | STRG.14382_chr08_-, gene_12487 |
| Tamaricaceae | Tamarix chinensis | 1 | TC12G1798 |
| Zosteraceae | Zostera marina | 1 | Zosma03g36370.v3.1 |