Basic Information
Locus ID:
gene.Thate07g16860
Species & Taxonomic ID:
Thalassia testudinum & 55497
Genome Assembly:
GCA_037157565.1
Description:
Belongs to the protein kinase superfamily. Ser Thr protein kinase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Chr07 | 369079989 | 369085785 | - | gene.Thate07g16860 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.70 | 110,951.34 Da | 44.30 | 98.80 | -0.13 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 689 | 958 | 1.64464E-90 | - |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 24 | 61 | 2.1E-9 | IPR013210 |
| Pfam | PF00069 | Protein kinase domain | 685 | 956 | 1.5E-44 | IPR000719 |
| Pfam | PF00560 | Leucine Rich Repeat | 452 | 474 | 0.54 | IPR001611 |
| Pfam | PF13855 | Leucine rich repeat | 521 | 579 | 4.7E-7 | IPR001611 |
| Pfam | PF13855 | Leucine rich repeat | 286 | 345 | 5.1E-8 | IPR001611 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 670 | 958 | 2.29E-73 | IPR011009 |
| SUPERFAMILY | SSF52058 | L domain-like | 41 | 344 | 5.95E-51 | - |
| SUPERFAMILY | SSF52058 | L domain-like | 285 | 587 | 6.8E-54 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 284 | 618 | 1.7E-89 | IPR032675 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 648 | 761 | 1.9E-21 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 762 | 986 | 4.6E-59 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 23 | 178 | 4.1E-34 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 179 | 283 | 3.4E-28 | IPR032675 |
| SMART | SM00369 | LRR_typ_2 | 188 | 213 | 84.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 164 | 187 | 150.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 543 | 567 | 6.1 | IPR003591 |
| SMART | SM00220 | serkin_6 | 683 | 959 | 1.7E-37 | IPR000719 |
| SMART | SM00369 | LRR_typ_2 | 308 | 332 | 140.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 428 | 452 | 200.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 90 | 115 | 0.94 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 237 | 261 | 2.4 | IPR003591 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 683 | 959 | 38.096088 | IPR000719 |
| ProSiteProfiles | PS51450 | Leucine-rich repeat profile. | 92 | 113 | 7.858268 | IPR001611 |
| ProSiteProfiles | PS51450 | Leucine-rich repeat profile. | 142 | 164 | 7.157505 | IPR001611 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 689 | 711 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 806 | 818 | - | IPR008271 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 987 | 1024 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G25930.1 | Protein kinase family protein with leucine-rich repeat domain. | 0 |
| RefSeq | XP_003566022.1 | receptor-like protein kinase HSL1 [Brachypodium distachyon] | 0 |
| Q8GRU6 | Leucine-rich repeat receptor-like kinase protein HAR1 OS=Lotus japonicus OX=34305 GN=HAR1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A843TIA9 | Protein kinase domain-containing protein OS=Colocasia esculenta OX=4460 GN=Taro_004509 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology