Basic Information
Locus ID:
gene.Thate07g16510
Species & Taxonomic ID:
Thalassia testudinum & 55497
Genome Assembly:
GCA_037157565.1
Description:
Holliday junction DNA helicase ruvB N-terminus
Maps and Mapping Data
| Chromosome/Scaffold | Start | End | Strand | ID |
|---|---|---|---|---|
| Chr07 | 363759694 | 363784804 | + | gene.Thate07g16510 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.28 | 29,959.95 Da | 35.73 | 78.33 | -0.51 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd00009 | AAA | 1 | 120 | 4.61608E-14 | - |
| Pfam | PF17862 | AAA+ lid domain | 143 | 178 | 2.9E-11 | IPR041569 |
| Pfam | PF00004 | ATPase family associated with various cellular activities (AAA) | 1 | 119 | 4.7E-29 | IPR003959 |
| SUPERFAMILY | SSF52540 | P-loop containing nucleoside triphosphate hydrolases | 1 | 188 | 5.33E-43 | IPR027417 |
| Gene3D | G3DSA:3.40.50.300 | - | 1 | 229 | 4.2E-69 | IPR027417 |
| Gene3D | G3DSA:1.10.8.60 | - | 121 | 223 | 4.2E-69 | - |
| ProSitePatterns | PS00674 | AAA-protein family signature. | 92 | 111 | - | IPR003960 |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G64110.1 | P-loop containing nucleoside triphosphate hydrolases superfamily protein. | 0 |
| RefSeq | XP_027159153.1 | spastin isoform X2 [Coffea eugenioides] | 0 |
| Q7ZZ25 | Outer mitochondrial transmembrane helix translocase OS=Danio rerio OX=7955 GN=atad1a PE=2 SV=2 | 0 | |
| TrEMBL | M1BRP4 | ATP binding protein OS=Solanum tuberosum OX=4113 GN=102581738 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology