Basic Information
Locus ID:
gene.Thate07g14770
Species & Taxonomic ID:
Thalassia testudinum & 55497
Genome Assembly:
GCA_037157565.1
Description:
Ring finger domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Chr07 | 301731891 | 301732739 | - | gene.Thate07g14770 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.71 | 30,982.24 Da | 51.75 | 88.79 | -0.10 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd16448 | RING-H2 | 228 | 274 | 1.47565E-10 | - |
| Pfam | PF13639 | Ring finger domain | 227 | 274 | 2.2E-8 | IPR001841 |
| SUPERFAMILY | SSF57850 | RING/U-box | 222 | 274 | 1.9E-12 | - |
| Gene3D | G3DSA:3.30.40.10 | Zinc/RING finger domain, C3HC4 (zinc finger) | 211 | 282 | 6.0E-14 | IPR013083 |
| SMART | SM00184 | ring_2 | 228 | 275 | 3.7E-5 | IPR001841 |
| ProSiteProfiles | PS50089 | Zinc finger RING-type profile. | 228 | 276 | 11.205767 | IPR001841 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 153 | 182 | - | - |
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| RefSeq | XP_022131659.1 | uncharacterized protein LOC111004784 [Momordica charantia] | 0 |
| TrEMBL | A0A022QT17 | RING-type domain-containing protein OS=Erythranthe guttata OX=4155 GN=MIMGU_mgv1a026541mg PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene.Thate07g14770.