Basic Information
Locus ID:
gene.Thate07g10530
Species & Taxonomic ID:
Thalassia testudinum & 55497
Genome Assembly:
GCA_037157565.1
Description:
Lipopolysaccharide kinase (Kdo/WaaP) family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Chr07 | 147384792 | 147457144 | + | gene.Thate07g10530 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.03 | 70,561.77 Da | 43.57 | 83.19 | -0.43 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd05117 | STKc_CAMK | 172 | 434 | 3.36171E-129 | - |
| Pfam | PF00069 | Protein kinase domain | 173 | 435 | 6.4E-70 | IPR000719 |
| SUPERFAMILY | SSF47473 | EF-hand | 463 | 617 | 9.6E-19 | IPR011992 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 170 | 494 | 9.73E-83 | IPR011009 |
| Gene3D | G3DSA:1.10.238.10 | - | 454 | 617 | 6.5E-18 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 263 | 447 | 3.0E-58 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 166 | 262 | 5.8E-24 | - |
| SMART | SM00220 | serkin_6 | 173 | 435 | 1.5E-98 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 173 | 435 | 50.194794 | IPR000719 |
| ProSiteProfiles | PS50222 | EF-hand calcium-binding domain profile. | 477 | 512 | 8.711163 | IPR002048 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 179 | 205 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 297 | 309 | - | IPR008271 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 74 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 35 | 53 | - | - |
Gene Ontology
Biological Process:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G41140.1 | CDPK-related kinase 1. Encodes CDPK-related kinase 1 (CRK1). | 0 |
| RefSeq | XP_009420969.1 | PREDICTED: calcium/calmodulin-dependent serine/threonine-protein kinase 1-like [Musa acuminata subsp. malaccensis] | 0 |
| Q10KY3 | Calcium/calmodulin-dependent serine/threonine-protein kinase 1 OS=Oryza sativa subsp. japonica OX=39947 GN=CAMK1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A804KVK3 | (wild Malaysian banana) hypothetical protein OS=Musa acuminata subsp. malaccensis OX=214687 GN=104000610 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology