Basic Information
Locus ID:
gene.Thate07g09490
Species & Taxonomic ID:
Thalassia testudinum & 55497
Genome Assembly:
GCA_037157565.1
Short Name:
CDPK1
Description:
calcium-dependent protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Chr07 | 109873292 | 109874204 | + | gene.Thate07g09490 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.91 | 19,667.63 Da | 38.89 | 108.79 | -0.16 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| SUPERFAMILY | SSF47473 | EF-hand | 97 | 172 | 3.74E-8 | IPR011992 |
| Gene3D | G3DSA:1.10.238.10 | - | 55 | 172 | 5.2E-14 | - |
| Gene3D | G3DSA:1.10.238.10 | - | 80 | 150 | 5.2E-14 | - |
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G61950.1 | calcium-dependent protein kinase 19. member of Calcium Dependent Protein Kinase | 0 |
| RefSeq | XP_016711452.1 | calcium-dependent protein kinase 21-like isoform X3 [Gossypium hirsutum] | 0 |
| Q1PFH8 | Calcium-dependent protein kinase 19 OS=Arabidopsis thaliana OX=3702 GN=CPK19 PE=2 SV=1 | 0 | |
| TrEMBL | A0A1U8LA17 | calcium-dependent protein kinase 21-like isoform X3 OS=Gossypium hirsutum OX=3635 GN=LOC107925306 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Hydrocharitaceae | Thalassia testudinum | 2 | gene.Thate07g09480, gene.Thate07g09490 |