Basic Information
Locus ID:
gene.Thate07g09480
Species & Taxonomic ID:
Thalassia testudinum & 55497
Genome Assembly:
GCA_037157565.1
Description:
EF-hand domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Chr07 | 109417943 | 109420229 | + | gene.Thate07g09480 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.61 | 43,681.11 Da | 38.98 | 99.30 | -0.22 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00069 | Protein kinase domain | 38 | 173 | 1.4E-18 | IPR000719 |
| SUPERFAMILY | SSF47473 | EF-hand | 313 | 386 | 1.77E-7 | IPR011992 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 21 | 253 | 8.61E-27 | IPR011009 |
| Gene3D | G3DSA:1.10.238.10 | - | 294 | 364 | 3.7E-13 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 39 | 118 | 3.9E-25 | - |
| Gene3D | G3DSA:1.10.238.10 | - | 269 | 386 | 3.7E-13 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 71 | 253 | 3.9E-25 | - |
| SMART | SM00220 | serkin_6 | 35 | 252 | 8.3E-10 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 35 | 327 | 13.36159 | IPR000719 |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G61950.1 | calcium-dependent protein kinase 19. member of Calcium Dependent Protein Kinase | 0 |
| RefSeq | XP_024040375.1 | calcium-dependent protein kinase 29 isoform X2 [Citrus clementina] | 0 |
| Q1PFH8 | Calcium-dependent protein kinase 19 OS=Arabidopsis thaliana OX=3702 GN=CPK19 PE=2 SV=1 | 0 | |
| TrEMBL | A0A7J6GZQ1 | Calcium-dependent protein kinase 29 OS=Cannabis sativa OX=3483 GN=F8388_012431 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Hydrocharitaceae | Thalassia testudinum | 2 | gene.Thate07g09480, gene.Thate07g09490 |