Basic Information
Locus ID:
gene.Thate07g08490
Species & Taxonomic ID:
Thalassia testudinum & 55497
Genome Assembly:
GCA_037157565.1
Description:
glycerophosphoryl diester phosphodiesterase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Chr07 | 93170822 | 93366028 | + | gene.Thate07g08490 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.60 | 83,277.27 Da | 49.95 | 96.08 | -0.03 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF03009 | Glycerophosphoryl diester phosphodiesterase family | 363 | 654 | 3.0E-36 | IPR030395 |
| SUPERFAMILY | SSF51695 | PLC-like phosphodiesterases | 50 | 355 | 2.88E-40 | IPR017946 |
| SUPERFAMILY | SSF51695 | PLC-like phosphodiesterases | 357 | 654 | 2.62E-43 | IPR017946 |
| Gene3D | G3DSA:3.20.20.190 | Phosphatidylinositol (PI) phosphodiesterase | 49 | 355 | 1.5E-30 | IPR017946 |
| Gene3D | G3DSA:3.20.20.190 | Phosphatidylinositol (PI) phosphodiesterase | 356 | 656 | 6.0E-48 | IPR017946 |
| ProSiteProfiles | PS51704 | GP-PDE domain profile. | 358 | 659 | 29.757795 | IPR030395 |
| ProSiteProfiles | PS51704 | GP-PDE domain profile. | 51 | 355 | 26.867039 | IPR030395 |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G55480.1 | SHV3-like 1. Glycerophosphoryl diester phosphodiesterase-like protein involved in cell wall cellulose accumulation and pectin linking. Impacts root hair, trichome and epidermal cell development. | 0 |
| RefSeq | XP_010913177.1 | glycerophosphodiester phosphodiesterase GDPDL3 isoform X1 [Elaeis guineensis] | 0 |
| Q9FJ62 | Glycerophosphodiester phosphodiesterase GDPDL4 OS=Arabidopsis thaliana OX=3702 GN=GDPDL4 PE=1 SV=1 | 0 | |
| TrEMBL | A0A0K9PJI7 | glycerophosphodiester phosphodiesterase OS=Zostera marina OX=29655 GN=ZOSMA_221G00170 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology