Basic Information
Locus ID:
gene.Thate07g07700
Species & Taxonomic ID:
Thalassia testudinum & 55497
Genome Assembly:
GCA_037157565.1
Description:
AT hook motif family protein, expressed
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Chr07 | 69270538 | 69293809 | - | gene.Thate07g07700 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.88 | 98,726.94 Da | 51.95 | 63.10 | -0.92 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd04508 | TUDOR | 641 | 685 | 1.14193E-4 | IPR002999 |
| SUPERFAMILY | SSF63748 | Tudor/PWWP/MBT | 638 | 685 | 4.59E-7 | - |
| Gene3D | G3DSA:2.30.30.140 | - | 629 | 685 | 1.2E-10 | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 805 | 849 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 391 | 407 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 421 | 443 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 692 | 920 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 602 | 635 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 519 | 592 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 748 | 765 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 275 | 635 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 708 | 732 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 872 | 905 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 766 | 782 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 906 | 920 | - | - |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G31880.2 | 0 | |
| RefSeq | XP_008799642.2 | uncharacterized protein LOC103714235 isoform X1 [Phoenix dactylifera] | 0 |
| Q8GUP3 | Sister chromatid cohesion protein PDS5 homolog C OS=Arabidopsis thaliana OX=3702 GN=PDS5C PE=1 SV=1 | 0 | |
| TrEMBL | A0A8B7CIG5 | uncharacterized protein LOC103714235 isoform X1 OS=Phoenix dactylifera OX=42345 GN=LOC103714235 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology