Basic Information
Locus ID:
gene.Thate07g03670
Species & Taxonomic ID:
Thalassia testudinum & 55497
Genome Assembly:
GCA_037157565.1
Description:
Leucine rich repeat N-terminal domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Chr07 | 19501631 | 19502794 | - | gene.Thate07g03670 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 10.51 | 42,123.21 Da | 57.83 | 99.72 | -0.11 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF13855 | Leucine rich repeat | 103 | 164 | 1.6E-9 | IPR001611 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 10 | 48 | 1.8E-6 | IPR013210 |
| Pfam | PF13516 | Leucine Rich repeat | 173 | 187 | 0.98 | IPR001611 |
| SUPERFAMILY | SSF52058 | L domain-like | 32 | 350 | 5.61E-44 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 266 | 350 | 8.9E-7 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 173 | 265 | 2.7E-18 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 10 | 172 | 6.0E-35 | IPR032675 |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G03440.1 | Leucine-rich repeat (LRR) family protein. | 0 |
| RefSeq | XP_038981354.1 | probable inactive leucine-rich repeat receptor kinase XIAO [Phoenix dactylifera] | 0 |
| TrEMBL | A0A8B9ADQ2 | probable inactive leucine-rich repeat receptor kinase XIAO OS=Phoenix dactylifera OX=42345 GN=LOC103717236 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology