Basic Information
Locus ID:
gene.Thate07g01790
Species & Taxonomic ID:
Thalassia testudinum & 55497
Genome Assembly:
GCA_037157565.1
Description:
Myb/SANT-like DNA-binding domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Chr07 | 7013085 | 7014737 | - | gene.Thate07g01790 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.93 | 61,526.55 Da | 76.81 | 52.04 | -1.09 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF13837 | Myb/SANT-like DNA-binding domain | 141 | 286 | 5.3E-20 | IPR044822 |
| Gene3D | G3DSA:1.10.10.60 | - | 144 | 236 | 2.4E-13 | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 526 | 550 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 31 | 71 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 405 | 433 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 25 | 75 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 358 | 380 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 117 | 141 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 168 | 201 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 381 | 400 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 343 | 357 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 343 | 434 | - | - |
| Coils | Coil | Coil | 460 | 480 | - | - |
| Coils | Coil | Coil | 488 | 510 | - | - |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G10040.1 | sequence-specific DNA binding transcription factors. | 0 |
| RefSeq | XP_008777881.1 | la-related protein Larp4B-like [Phoenix dactylifera] | 0 |
| TrEMBL | A0A7I8L813 | Myb_DNA-bind_4 domain-containing protein OS=Spirodela intermedia OX=51605 GN=SI8410_11016092 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology