Basic Information
Locus ID:
gene.Thate06g24990
Species & Taxonomic ID:
Thalassia testudinum & 55497
Genome Assembly:
GCA_037157565.1
Description:
Translocase of chloroplast 159/132, membrane anchor domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Chr06 | 405251328 | 405309459 | - | gene.Thate06g24990 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.77 | 88,564.82 Da | 39.04 | 88.83 | -0.32 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF11886 | Translocase of chloroplast 159/132, membrane anchor domain | 524 | 785 | 1.4E-93 | IPR024283 |
| Pfam | PF04548 | AIG1 family | 180 | 314 | 1.6E-25 | IPR006703 |
| SUPERFAMILY | SSF52540 | P-loop containing nucleoside triphosphate hydrolases | 173 | 306 | 3.58E-22 | IPR027417 |
| Gene3D | G3DSA:3.40.50.300 | - | 156 | 396 | 2.3E-56 | IPR027417 |
| ProSiteProfiles | PS51720 | AIG1-type G domain profile. | 176 | 405 | 30.181005 | IPR006703 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 498 | 517 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 44 | 77 | - | - |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G20300.1 | Avirulence induced gene (AIG1) family protein. | 0 |
| RefSeq | XP_010928306.1 | translocase of chloroplast 90, chloroplastic isoform X1 [Elaeis guineensis] | 0 |
| Q6S5G3 | Translocase of chloroplast 90, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=TOC90 PE=1 SV=1 | 0 | |
| TrEMBL | A0A3S4PIR2 | Translocase of chloroplast 90, chloroplastic isoform X1 OS=Cinnamomum micranthum f. kanehirae OX=337451 GN=CKAN_02015900 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology