Basic Information
Locus ID:
gene.Thate06g21590
Species & Taxonomic ID:
Thalassia testudinum & 55497
Genome Assembly:
GCA_037157565.1
Description:
lysM domain receptor-like kinase 4
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Chr06 | 245722169 | 245724202 | + | gene.Thate06g21590 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.85 | 74,056.09 Da | 44.78 | 87.03 | -0.17 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00069 | Protein kinase domain | 399 | 646 | 2.1E-37 | IPR000719 |
| Pfam | PF01476 | LysM domain | 201 | 235 | 0.012 | IPR018392 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 383 | 650 | 6.51E-59 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 441 | 663 | 4.3E-50 | - |
| Gene3D | G3DSA:3.10.350.10 | LysM domain | 190 | 246 | 2.4E-5 | IPR036779 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 346 | 439 | 2.0E-12 | - |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 364 | 657 | 31.029089 | IPR000719 |
| ProSiteProfiles | PS51782 | LysM domain profile. | 190 | 234 | 9.041041 | IPR018392 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G33580.1 | Protein kinase superfamily protein. | 0 |
| RefSeq | XP_010913816.1 | protein LYK5-like [Elaeis guineensis] | 0 |
| O22808 | Protein LYK5 OS=Arabidopsis thaliana OX=3702 GN=LYK5 PE=2 SV=1 | 0 | |
| TrEMBL | A0A6I9QT82 | protein LYK5-like OS=Elaeis guineensis var. tenera OX=51953 GN=LOC105039373 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology