Basic Information
Locus ID:
gene.Thate06g16850
Species & Taxonomic ID:
Thalassia testudinum & 55497
Genome Assembly:
GCA_037157565.1
Description:
(NAC) domain-containing protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Chr06 | 122076318 | 122121216 | - | gene.Thate06g16850 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.42 | 44,962.41 Da | 43.95 | 62.16 | -0.81 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF02365 | No apical meristem (NAM) protein | 59 | 197 | 5.6E-22 | IPR003441 |
| SUPERFAMILY | SSF101941 | NAC domain | 43 | 216 | 6.28E-40 | IPR036093 |
| Gene3D | G3DSA:2.170.150.80 | NAC domain | 67 | 221 | 3.4E-31 | IPR036093 |
| ProSiteProfiles | PS51005 | NAC domain profile. | 58 | 216 | 32.037636 | IPR003441 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 363 | 382 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 219 | 258 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 225 | 244 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G25580.1 | NAC (No Apical Meristem) domain transcriptional regulator superfamily protein. Encodes suppressor of gamma response 1 (SOG1), a putative transcription factor governing multiple responses to DNA damage. | 0 |
| RefSeq | XP_010932619.1 | SUPPRESSOR OF GAMMA RESPONSE 1 [Elaeis guineensis] | 0 |
| Q6NQK2 | SUPPRESSOR OF GAMMA RESPONSE 1 OS=Arabidopsis thaliana OX=3702 GN=SOG1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A843XWD2 | NAC domain-containing protein OS=Colocasia esculenta OX=4460 GN=Taro_056119 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology