Basic Information
Locus ID:
gene.Thate06g16530
Species & Taxonomic ID:
Thalassia testudinum & 55497
Genome Assembly:
GCA_037157565.1
Description:
DNA binding domain with preference for A/T rich regions
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Chr06 | 118205679 | 118206788 | + | gene.Thate06g16530 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.22 | 40,073.51 Da | 66.31 | 68.83 | -0.55 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd06257 | DnaJ | 69 | 126 | 1.72696E-6 | IPR001623 |
| Pfam | PF00226 | DnaJ domain | 69 | 135 | 3.6E-9 | IPR001623 |
| SUPERFAMILY | SSF46565 | Chaperone J-domain | 60 | 138 | 2.22E-12 | IPR036869 |
| Gene3D | G3DSA:1.10.287.110 | DnaJ domain | 59 | 156 | 2.7E-10 | IPR036869 |
| SMART | SM00271 | dnaj_3 | 68 | 130 | 0.0076 | IPR001623 |
| ProSiteProfiles | PS50076 | dnaJ domain profile. | 69 | 138 | 12.750256 | IPR001623 |
| ProSitePatterns | PS00636 | Nt-dnaJ domain signature. | 115 | 134 | - | IPR018253 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 254 | 332 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 144 | 169 | - | - |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G05230.1 | DNAJ heat shock N-terminal domain-containing protein. | 0 |
| RefSeq | XP_020101189.1 | uncharacterized protein LOC109719078 [Ananas comosus] | 0 |
| TrEMBL | A0A0K9P300 | J domain-containing protein OS=Zostera marina OX=29655 GN=ZOSMA_450G00020 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology