Basic Information
Locus ID:
gene.Thate06g14960
Species & Taxonomic ID:
Thalassia testudinum & 55497
Genome Assembly:
GCA_037157565.1
Short Name:
EBF1
Description:
EIN3-binding F-box protein 1
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Chr06 | 103126971 | 103129890 | - | gene.Thate06g14960 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.74 | 85,266.17 Da | 51.05 | 97.28 | 0.09 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF13516 | Leucine Rich repeat | 720 | 739 | 0.017 | IPR001611 |
| Pfam | PF13516 | Leucine Rich repeat | 419 | 441 | 0.53 | IPR001611 |
| Pfam | PF13516 | Leucine Rich repeat | 692 | 714 | 1.7 | IPR001611 |
| Pfam | PF00646 | F-box domain | 219 | 257 | 2.3E-4 | IPR001810 |
| SUPERFAMILY | SSF52047 | RNI-like | 324 | 799 | 4.51E-42 | - |
| SUPERFAMILY | SSF81383 | F-box domain | 209 | 252 | 5.1E-6 | IPR036047 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 211 | 443 | 4.8E-35 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 606 | 803 | 7.5E-32 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 444 | 597 | 1.6E-18 | IPR032675 |
| SMART | SM00367 | LRR_CC_2 | 341 | 366 | 0.71 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 744 | 769 | 4.0 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 367 | 392 | 1.2E-4 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 393 | 418 | 5.5E-5 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 717 | 741 | 19.0 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 419 | 444 | 0.16 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 635 | 660 | 0.23 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 663 | 688 | 23.0 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 499 | 524 | 9.4 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 691 | 716 | 0.06 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 525 | 550 | 7.2 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 609 | 634 | 16.0 | IPR006553 |
Gene Ontology
Molecular Function:
KEGG Pathway
KO Term:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G25490.1 | EIN3-binding F box protein 1. Encodes an F-box protein involved in the ubiquitin/proteasome-dependent proteolysis of EIN3. | 0 |
| RefSeq | XP_038984683.1 | EIN3-binding F-box protein 1-like [Phoenix dactylifera] | 0 |
| Q9SKK0 | EIN3-binding F-box protein 1 OS=Arabidopsis thaliana OX=3702 GN=EBF1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A1D1Z617 | EIN3-binding F-box protein 1 OS=Anthurium amnicola OX=1678845 GN=EBF1_4 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology