halophFGD

Basic Information

Locus ID: gene.Thate06g11960

Species & Taxonomic ID: Thalassia testudinum & 55497

Genome Assembly: GCA_037157565.1

Description: Muniscin C-terminal mu homology domain

Maps and Mapping Data

Chromosome	Start	End	Strand	ID
Chr06	72170709	72172434	-	gene.Thate06g11960

Protein Data

Protein Properties:

Theoretical pI	Molecular Weight	Instability Index	Aliphatic Index	GRAVY
6.50	33,949.28 Da	54.84	97.82	0.03

Protein Domain:

Category	ID	Description	Start	End	Evalue/Score	InterPro ID
MobiDBLite	mobidb-lite	consensus disorder prediction	212	251	-	-
MobiDBLite	mobidb-lite	consensus disorder prediction	234	251	-	-
MobiDBLite	mobidb-lite	consensus disorder prediction	217	233	-	-

KEGG Pathway

KO Term:

K10875 (DNA repair and recombination protein RAD54 and RAD54-like protein [EC:5.6.2.-])

Pathway:

ko03440 (Homologous recombination) map03440 (Homologous recombination)

Best hit

Source	Best Hit ID	Description
TAIR	AT5G57460.1
RefSeq	XP_017698258.2	F-BAR domain only protein 1-like [Phoenix dactylifera]
TrEMBL	A0A8B7MUS8	F-BAR domain only protein 1-like OS=Phoenix dactylifera OX=42345 GN=LOC103707091 PE=4 SV=1

Expression

BioProject	Accession	TPM	Cultivar	Tissue	Development Stage	Sample Name	Description
No sample metadata found.

Network

No network data available for this species.

Orthology

Family	Species	Count	Orthologous Genes
Hydrocharitaceae	Thalassia testudinum	14	gene.Thate02g30180, gene.Thate03g08470, gene.Thate04g16600 ... gene.Thate04g28040, gene.Thate04g28050, gene.Thate05g13670, gene.Thate05g17870, gene.Thate05g22830, gene.Thate05g27380, gene.Thate06g11940, gene.Thate06g11960, gene.Thate07g02280, gene.Thate08g24690, gene.Thate09g07300