halophFGD

Basic Information

Locus ID: gene.Thate06g08540

Species & Taxonomic ID: Thalassia testudinum & 55497

Genome Assembly: GCA_037157565.1

Description: Random slug protein 5-like

Maps and Mapping Data

Chromosome	Start	End	Strand	ID
Chr06	48999586	49002290	-	gene.Thate06g08540

Protein Data

Protein Properties:

Theoretical pI	Molecular Weight	Instability Index	Aliphatic Index	GRAVY
7.67	39,054.01 Da	47.65	78.29	-0.66

Protein Domain:

Category	ID	Description	Start	End	Evalue/Score	InterPro ID
CDD	cd00170	SEC14	98	238	3.34268E-35	IPR001251
Pfam	PF00650	CRAL/TRIO domain	86	238	6.6E-32	IPR001251
SUPERFAMILY	SSF46938	CRAL/TRIO N-terminal domain	14	82	7.72E-17	IPR036273
SUPERFAMILY	SSF52087	CRAL/TRIO domain	80	263	7.32E-47	IPR036865
Gene3D	G3DSA:3.40.525.10	-	2	287	7.5E-78	IPR036865
SMART	SM00516	sec14_4	86	240	5.0E-42	IPR001251
SMART	SM01100	CRAL_TRIO_N_2	41	66	0.0067	IPR011074
ProSiteProfiles	PS50191	CRAL-TRIO lipid binding domain profile.	80	243	18.936728	IPR001251
MobiDBLite	mobidb-lite	consensus disorder prediction	298	328	-	-

Best hit

Source	Best Hit ID	Description
TAIR	AT4G08690.1	Sec14p-like phosphatidylinositol transfer family protein.
RefSeq	XP_002513889.1	phosphatidylinositol transfer protein 3 isoform X1 [Ricinus communis]
Swiss-Prot	Q55CU8	Phosphatidylinositol transfer protein 3 OS=Dictyostelium discoideum OX=44689 GN=pitC PE=2 SV=1
TrEMBL	A0A1D1XJ98	Random slug protein 5 OS=Anthurium amnicola OX=1678845 GN=rsc5_10 PE=4 SV=1

Expression

BioProject	Accession	TPM	Cultivar	Tissue	Development Stage	Sample Name	Description
No sample metadata found.

Network

No network data available for this species.

Orthology

Family	Species	Count	Orthologous Genes
Acanthaceae	Avicennia marina	7	jg10606, jg10838, jg17274, jg22867, jg39760, jg4156, jg6103
Aizoaceae	Mesembryanthemum crystallinum	1	gene_24036
Amaranthaceae	Atriplex hortensis	2	Ah023961, Ah027489
Amaranthaceae	Beta vulgaris	2	BVRB_1g009550, BVRB_6g128720
Amaranthaceae	Salicornia bigelovii	4	Sbi_jg13236, Sbi_jg28971, Sbi_jg2967, Sbi_jg52618
Amaranthaceae	Salicornia europaea	2	Seu_jg6913, Seu_jg9232
Amaranthaceae	Suaeda aralocaspica	2	GOSA_00013279, GOSA_00022045
Amaranthaceae	Suaeda glauca	5	Sgl11743, Sgl11906, Sgl17232, Sgl34534, Sgl39947
Amaranthaceae	Chenopodium album	5	gene:ENSEOMG00000000129, gene:ENSEOMG00000012614 ... gene:ENSEOMG00000025637, gene:ENSEOMG00000035771, gene:ENSEOMG00000049948
Amaranthaceae	Chenopodium quinoa	4	CQ.Regalona.r1.1AG0012250, CQ.Regalona.r1.1BG0013840 ... CQ.Regalona.r1.6AG0026730, CQ.Regalona.r1.6BG0028150
Anacardiaceae	Pistacia vera	3	pistato.v30046400, pistato.v30093960, pistato.v30207830
Apiaceae	Apium graveolens	8	Ag10G02160, Ag11G04379, Ag1G00326, Ag4G00465, Ag4G02725 ... Ag6G02517, Ag8G01682, Ag9G02197
Arecaceae	Cocos nucifera	4	COCNU_01G015730, COCNU_05G001170, COCNU_05G006220 ... COCNU_13G005040
Arecaceae	Phoenix dactylifera	6	gene-LOC103704242, gene-LOC103707604, gene-LOC103707673 ... gene-LOC103720317, gene-LOC120106847, gene-LOC120108304
Asparagaceae	Asparagus officinalis	5	AsparagusV1_03.183.V1.1, AsparagusV1_03.2423.V1.1 ... AsparagusV1_03.3174.V1.1, AsparagusV1_03.698.V1.1, AsparagusV1_08.2211.V1.1
Asteraceae	Flaveria trinervia	7	Ftri10G19098, Ftri10G27777, Ftri13G29733, Ftri16G07751 ... Ftri18G08624, Ftri1G32021, Ftri9G25622
Brassicaceae	Arabidopsis thaliana	4	AT1G22180.2, AT1G75170.1, AT4G08690.2, AT4G36640.1
Brassicaceae	Eutrema salsugineum	4	Thhalv10008258m.g.v1.0, Thhalv10018941m.g.v1.0 ... Thhalv10025882m.g.v1.0, Thhalv10028819m.g.v1.0
Brassicaceae	Schrenkiella parvula	4	Sp1g19680.v2.2, Sp5g30320.v2.2, Sp6g09090.v2.2 ... Sp7g34300.v2.2
Brassicaceae	Brassica nigra	10	BniB02g088080.2N, BniB02g088090.2N, BniB03g013900.2N ... BniB03g030060.2N, BniB03g053580.2N, BniB04g037350.2N, BniB04g054830.2N, BniB05g002150.2N, BniB08g031620.2N, BniB08g034760.2N
Casuarinaceae	Casuarina equisetifolia	3	Ceq03G1603, Ceq05G0447, Ceq09G1954
Casuarinaceae	Casuarina glauca	2	Cgl03G1730, Cgl05G0481
Cymodoceaceae	Cymodocea nodosa	4	gene.Cymno03g02920, gene.Cymno05g10720, gene.Cymno06g01320 ... gene.Cymno11g03820
Dunaliellaceae	Dunaliella salina	2	Dusal.0229s00011.v1.0, Dusal.0409s00008.v1.0
Hydrocharitaceae	Thalassia testudinum	3	gene.Thate05g28280, gene.Thate06g08540, gene.Thate06g14290
Malvaceae	Hibiscus hamabo Siebold & Zucc.	1	nbisL1-mrna-2106
Nitrariaceae	Nitraria sibirica	6	evm.TU.LG02.2326, evm.TU.LG02.2327, evm.TU.LG02.2328 ... evm.TU.LG03.1937, evm.TU.LG06.1020, evm.TU.LG06.568
Plantaginaceae	Plantago ovata	3	Pov_00002458, Pov_00024350, Pov_00028135
Plumbaginaceae	Limonium bicolor	5	Lb0G38247, Lb1G03740, Lb1G03747, Lb1G06273, Lb8G35932
Poaceae	Echinochloa crus-galli	19	AH01.770, AH01.771, AH02.922, AH05.3127, AH05.3129, BH01.914 ... AH07.3507, BH01.915, BH01.916, BH02.1207, BH05.3227, BH07.3322, CH01.931, CH01.932, CH01.933, CH02.1328, CH05.3281, CH05.3284, CH07.3389
Poaceae	Eleusine coracana subsp. coracana	15	gene-QOZ80_1AG0004600, gene-QOZ80_1BG0053020 ... gene-QOZ80_2AG0146010, gene-QOZ80_2BG0201550, gene-QOZ80_3AG0218270, gene-QOZ80_3AG0218280, gene-QOZ80_3AG0218290, gene-QOZ80_3BG0263510, gene-QOZ80_3BG0263520, gene-QOZ80_3BG0263530, gene-QOZ80_5AG0400530, gene-QOZ80_5AG0400560, gene-QOZ80_5AG0401180, gene-QOZ80_5BG0449130, gene-QOZ80_5BG0449140
Poaceae	Hordeum vulgare	6	HORVU.MOREX.r3.3HG0255150.1, HORVU.MOREX.r3.4HG0338590.1 ... HORVU.MOREX.r3.4HG0338600.1, HORVU.MOREX.r3.4HG0338630.1, HORVU.MOREX.r3.6HG0614480.1, HORVU.MOREX.r3.7HG0649980.1
Poaceae	Lolium multiflorum	7	gene-QYE76_023268, gene-QYE76_025402, gene-QYE76_052261 ... gene-QYE76_062260, gene-QYE76_062263, gene-QYE76_062264, gene-QYE76_062265
Poaceae	Oryza coarctata	9	Oco01G007280, Oco02G007550, Oco03G021820, Oco04G022470 ... Oco05G022180, Oco06G023060, Oco09G005450, Oco10G005390, Oco10G005400
Poaceae	Oryza sativa	5	LOC_Os01g16000.1, LOC_Os02g51610.1, LOC_Os03g51430.1 ... LOC_Os05g18294.1, LOC_Os05g18470.1
Poaceae	Paspalum vaginatum	7	gene-BS78_01G098700, gene-BS78_01G098800 ... gene-BS78_01G098900, gene-BS78_01G231200, gene-BS78_03G111100, gene-BS78_04G281200, gene-BS78_05G147300
Poaceae	Puccinellia tenuiflora	9	Pt_Chr0203268, Pt_Chr0203275, Pt_Chr0206789, Pt_Chr0206791 ... Pt_Chr0206792, Pt_Chr0501416, Pt_Chr0501421, Pt_Chr0603975, Pt_Chr0603997
Poaceae	Sporobolus alterniflorus	20	Chr01G006560, Chr01G006570, Chr01G006580, Chr01G010770 ... Chr01G032620, Chr02G026560, Chr03G001600, Chr04G027530, Chr05G004320, Chr07G026450, Chr08G003510, Chr09G019830, Chr0G013150, Chr0G027310, Chr12G026130, Chr12G026150, Chr12G030890, Chr13G004090, Chr18G004780, Chr22G012100
Poaceae	Thinopyrum elongatum	10	Tel3E01G315500, Tel3E01G728300, Tel4E01G017100 ... Tel4E01G017300, Tel4E01G094300, Tel4E01G094400, Tel4E01G094700, Tel4E01G094800, Tel6E01G543700, Tel7E01G195300
Poaceae	Triticum dicoccoides	15	gene_TRIDC3AG025200, gene_TRIDC3AG065000 ... gene_TRIDC3BG028960, gene_TRIDC3BG073640, gene_TRIDC4AG040570, gene_TRIDC4AG040580, gene_TRIDC4AG040590, gene_TRIDC4AG057640, gene_TRIDC4BG008600, gene_TRIDC4BG008610, gene_TRIDC4BG008620, gene_TRIDC6AG045650, gene_TRIDC6BG053250, gene_TRIDC7AG011140, gene_TRIDC7BG013380
Poaceae	Triticum aestivum	23	TraesCS3A02G181100.2, TraesCS3B02G211200.1 ... TraesCS3B02G500500.1, TraesCS3B02G502500.1, TraesCS3D02G186000.2, TraesCS3D02G453300.2, TraesCS4A02G259500.1, TraesCS4A02G259600.1, TraesCS4A02G259700.1, TraesCS4A02G395100.1, TraesCS4B02G055000.1, TraesCS4B02G055100.1, TraesCS4B02G055200.1, TraesCS4D02G055100.1, TraesCS4D02G055200.1, TraesCS4D02G055300.1, TraesCS4D02G055400.1, TraesCS6A02G302200.1, TraesCS6B02G331400.1, TraesCS6D02G281700.1, TraesCS7A02G094800.2, TraesCS7B02G089700.1, TraesCS7D02G090800.1
Poaceae	Zea mays	6	Zm00001eb055720_P001, Zm00001eb055730_P002 ... Zm00001eb128290_P001, Zm00001eb194240_P001, Zm00001eb284490_P001, Zm00001eb351090_P002
Poaceae	Zoysia japonica	6	nbis-gene-14903, nbis-gene-17872, nbis-gene-17873 ... nbis-gene-21812, nbis-gene-24532, nbis-gene-32478
Poaceae	Zoysia macrostachya	7	Zma_g17162, Zma_g27921, Zma_g27922, Zma_g592, Zma_g593 ... Zma_g7377, Zma_g9703
Portulacaceae	Portulaca oleracea	6	evm.TU.LG03.1607, evm.TU.LG04.1764, evm.TU.LG05.45 ... evm.TU.LG06.615, evm.TU.LG12.277, evm.TU.LG25.1287
Posidoniaceae	Posidonia oceanica	4	gene.Posoc01g23370, gene.Posoc02g06120, gene.Posoc03g26550 ... gene.Posoc04g07570
Rhizophoraceae	Bruguiera sexangula	4	evm.TU.Scaffold_3_RagTag.247, evm.TU.Scaffold_7_RagTag.1022 ... evm.TU.Scaffold_8_RagTag.1077, evm.TU.Scaffold_8_RagTag.717
Rhizophoraceae	Carallia pectinifolia	5	nbisL1-mrna-18823, nbisL1-mrna-19057, nbisL1-mrna-378 ... nbisL1-mrna-493, nbisL1-mrna-9523
Rhizophoraceae	Ceriops tagal	4	nbisL1-mrna-17077, nbisL1-mrna-19183, nbisL1-mrna-2132 ... nbisL1-mrna-2719
Rhizophoraceae	Ceriops zippeliana	4	nbisL1-mrna-15433, nbisL1-mrna-18263, nbisL1-mrna-5987 ... nbisL1-mrna-6844
Rhizophoraceae	Kandelia candel	4	evm.TU.utg000002l.775, evm.TU.utg000018l.360 ... evm.TU.utg000018l.537, evm.TU.utg000019l.1091
Rhizophoraceae	Kandelia obovata	4	Maker00002959, Maker00003829, Maker00010504, Maker00012814
Rhizophoraceae	Rhizophora apiculata	5	nbisL1-mrna-2973, nbisL1-mrna-3024, nbisL1-mrna-5123 ... nbisL1-mrna-6494, nbisL1-mrna-8200
Rhizophoraceae	Rhizophora mangle	6	nbisL1-mrna-19718, nbisL1-mrna-20262, nbisL1-mrna-20338 ... nbisL1-mrna-2328, nbisL1-mrna-25177, nbisL1-mrna-9922
Salicaceae	Populus euphratica	6	populus_peu14222, populus_peu16173, populus_peu23567 ... populus_peu23568, populus_peu30726, populus_peu32310
Solanaceae	Lycium barbarum	5	gene-LOC132604129, gene-LOC132607612, gene-LOC132624904 ... gene-LOC132627461, gene-LOC132628014
Solanaceae	Solanum chilense	5	SOLCI000066200, SOLCI001208700, SOLCI001544200 ... SOLCI003985600, SOLCI007323700
Solanaceae	Solanum pennellii	5	gene-LOC107006646, gene-LOC107011982, gene-LOC107017772 ... gene-LOC107018100, gene-LOC107030846
Tamaricaceae	Reaumuria soongarica	4	STRG.16368_chr06_+, STRG.25904_chr11_-, STRG.8885_chr03_- ... gene_8709
Tamaricaceae	Tamarix chinensis	4	TC03G2763, TC04G2222, TC09G0257, TC11G0637
Zosteraceae	Zostera marina	3	Zosma01g29710.v3.1, Zosma03g02620.v3.1, Zosma06g29900.v3.1