Basic Information
Locus ID:
gene.Thate06g06710
Species & Taxonomic ID:
Thalassia testudinum & 55497
Genome Assembly:
GCA_037157565.1
Description:
Belongs to the glycosyltransferase 8 family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Chr06 | 40021157 | 40038547 | + | gene.Thate06g06710 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.92 | 79,012.35 Da | 40.07 | 80.04 | -0.52 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd06429 | GT8_like_1 | 380 | 678 | 5.01493E-126 | - |
| Pfam | PF01501 | Glycosyl transferase family 8 | 349 | 664 | 3.4E-97 | IPR002495 |
| SUPERFAMILY | SSF53448 | Nucleotide-diphospho-sugar transferases | 380 | 688 | 1.86E-69 | IPR029044 |
| Gene3D | G3DSA:3.90.550.10 | Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A | 382 | 686 | 4.9E-44 | IPR029044 |
| Coils | Coil | Coil | 168 | 191 | - | - |
| Coils | Coil | Coil | 311 | 331 | - | - |
| Coils | Coil | Coil | 249 | 279 | - | - |
Gene Ontology
Molecular Function:
KEGG Pathway
Pathway:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G61130.1 | galacturonosyltransferase 1. Encodes a protein with putative galacturonosyltransferase activity. | 0 |
| RefSeq | XP_039127501.1 | polygalacturonate 4-alpha-galacturonosyltransferase isoform X1 [Dioscorea cayenensis subsp. rotundata] | 0 |
| Q9LE59 | Polygalacturonate 4-alpha-galacturonosyltransferase OS=Arabidopsis thaliana OX=3702 GN=GAUT1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A1D1Z629 | Alpha-1,4-galacturonosyltransferase 1 OS=Anthurium amnicola OX=1678845 GN=GAUT1_4 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology