Basic Information
Locus ID:
gene.Thate06g06390
Species & Taxonomic ID:
Thalassia testudinum & 55497
Genome Assembly:
GCA_037157565.1
Description:
Belongs to the protein kinase superfamily. Ser Thr protein kinase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Chr06 | 38772246 | 38901845 | - | gene.Thate06g06390 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.81 | 102,961.34 Da | 40.53 | 97.07 | -0.08 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 624 | 890 | 8.86919E-96 | - |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 623 | 887 | 8.7E-45 | IPR001245 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 31 | 67 | 2.1E-9 | IPR013210 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 604 | 919 | 8.34E-78 | IPR011009 |
| SUPERFAMILY | SSF52058 | L domain-like | 40 | 385 | 3.29E-55 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 588 | 693 | 2.6E-36 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 290 | 380 | 2.0E-11 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 184 | 289 | 2.9E-27 | IPR032675 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 694 | 903 | 4.8E-57 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 30 | 183 | 2.4E-37 | IPR032675 |
| SMART | SM00220 | serkin_6 | 618 | 890 | 1.2E-38 | IPR000719 |
| SMART | SM00369 | LRR_typ_2 | 124 | 148 | 100.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 196 | 219 | 13.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 315 | 339 | 21.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 220 | 244 | 46.0 | IPR003591 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 618 | 903 | 38.110222 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 738 | 750 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 624 | 646 | - | IPR017441 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G06840.1 | Leucine-rich repeat protein kinase family protein. | 0 |
| RefSeq | XP_010278952.1 | PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At1g06840 [Nelumbo nucifera] | 0 |
| C0LGD7 | Probable LRR receptor-like serine/threonine-protein kinase At1g06840 OS=Arabidopsis thaliana OX=3702 GN=At1g06840 PE=1 SV=2 | 0 | |
| TrEMBL | A0A1D1XDA3 | Putative LRR receptor-like serine/threonine-protein kinase At1g06840 OS=Anthurium amnicola OX=1678845 GN=At1g06840_9 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology