Basic Information
Locus ID:
gene.Thate06g05970
Species & Taxonomic ID:
Thalassia testudinum & 55497
Genome Assembly:
GCA_037157565.1
Description:
Belongs to the protein kinase superfamily. Ser Thr protein kinase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Chr06 | 36451107 | 36457015 | + | gene.Thate06g05970 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.35 | 102,392.24 Da | 35.12 | 92.71 | -0.11 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 610 | 877 | 3.51592E-91 | - |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 607 | 804 | 1.2E-45 | IPR001245 |
| Pfam | PF13855 | Leucine rich repeat | 217 | 274 | 2.5E-7 | IPR001611 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 590 | 887 | 4.65E-77 | IPR011009 |
| SUPERFAMILY | SSF52058 | L domain-like | 33 | 350 | 2.95E-50 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 680 | 898 | 2.0E-53 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 3 | 157 | 1.9E-39 | IPR032675 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 575 | 679 | 1.6E-35 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 158 | 355 | 5.5E-41 | IPR032675 |
| SMART | SM00220 | serkin_6 | 604 | 877 | 2.0E-32 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 604 | 878 | 36.781628 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 724 | 736 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 610 | 632 | - | IPR017441 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 888 | 919 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G79620.1 | Leucine-rich repeat protein kinase family protein. | 0 |
| RefSeq | XP_028081351.1 | probable leucine-rich repeat receptor-like protein kinase At5g49770 [Camellia sinensis] | 0 |
| Q8GZ99 | Leucine-rich repeat receptor protein kinase HPCA1 OS=Arabidopsis thaliana OX=3702 GN=HPCA1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A8J5Z2R1 | Protein kinase domain-containing protein OS=Gossypium anomalum OX=47600 GN=CXB51_005584 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology