Basic Information
Locus ID:
gene.Thate06g05170
Species & Taxonomic ID:
Thalassia testudinum & 55497
Genome Assembly:
GCA_037157565.1
Description:
Organic cation carnitine transporter
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Chr06 | 31325707 | 31337077 | - | gene.Thate06g05170 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.35 | 27,218.10 Da | 38.80 | 106.64 | 0.30 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF07690 | Major Facilitator Superfamily | 31 | 221 | 8.6E-10 | IPR011701 |
| SUPERFAMILY | SSF103473 | MFS general substrate transporter | 146 | 218 | 1.7E-8 | IPR036259 |
| SUPERFAMILY | SSF103473 | MFS general substrate transporter | 10 | 109 | 5.62E-12 | IPR036259 |
| Gene3D | G3DSA:1.20.1250.20 | MFS general substrate transporter like domains | 20 | 122 | 1.0E-11 | IPR036259 |
| Gene3D | G3DSA:1.20.1250.20 | MFS general substrate transporter like domains | 141 | 221 | 6.3E-11 | IPR036259 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G13050.1 | Major facilitator superfamily protein. | 0 |
| RefSeq | XP_042491234.1 | organic cation/carnitine transporter 7-like [Macadamia integrifolia] | 0 |
| Q940M4 | Organic cation/carnitine transporter 7 OS=Arabidopsis thaliana OX=3702 GN=OCT7 PE=2 SV=1 | 0 | |
| TrEMBL | A0A426XN79 | MFS domain-containing protein (Fragment) OS=Ensete ventricosum OX=4639 GN=B296_00056728 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology