Basic Information
Locus ID:
gene.Thate06g05050
Species & Taxonomic ID:
Thalassia testudinum & 55497
Genome Assembly:
GCA_037157565.1
Description:
F-box protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Chr06 | 30851232 | 30866300 | + | gene.Thate06g05050 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.68 | 81,403.01 Da | 52.67 | 79.38 | -0.40 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00646 | F-box domain | 412 | 455 | 2.0E-8 | IPR001810 |
| SUPERFAMILY | SSF81383 | F-box domain | 409 | 464 | 4.45E-11 | IPR036047 |
| Gene3D | G3DSA:1.20.1280.50 | - | 400 | 488 | 7.5E-8 | - |
| SMART | SM00256 | fbox_2 | 416 | 456 | 0.0081 | IPR001810 |
| ProSiteProfiles | PS50181 | F-box domain profile. | 410 | 456 | 11.961449 | IPR001810 |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G32560.1 | F-box family protein. | 0 |
| RefSeq | XP_010910138.1 | F-box protein At2g32560 isoform X1 [Elaeis guineensis] | 0 |
| Q8RY82 | F-box protein At2g32560 OS=Arabidopsis thaliana OX=3702 GN=At2g32560 PE=2 SV=1 | 0 | |
| TrEMBL | A0A8K0HW92 | F-box protein OS=Cocos nucifera OX=13894 GN=COCNU_01G016680 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for gene.Thate06g05050.