Basic Information
Locus ID:
gene.Thate06g01130
Species & Taxonomic ID:
Thalassia testudinum & 55497
Genome Assembly:
GCA_037157565.1
Description:
Protein of unknown function (DUF295)
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Chr06 | 6866439 | 6867668 | + | gene.Thate06g01130 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 10.34 | 46,436.13 Da | 51.15 | 89.44 | -0.29 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00646 | F-box domain | 75 | 109 | 1.4E-7 | IPR001810 |
| SUPERFAMILY | SSF81383 | F-box domain | 65 | 117 | 8.63E-9 | IPR036047 |
| SMART | SM00256 | fbox_2 | 79 | 120 | 0.003 | IPR001810 |
| ProSiteProfiles | PS50181 | F-box domain profile. | 73 | 120 | 10.212818 | IPR001810 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 45 | 60 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 32 | 66 | - | - |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| RefSeq | XP_042519468.1 | putative F-box protein At5g55150 [Macadamia integrifolia] | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Hydrocharitaceae | Thalassia testudinum | 8 | gene.Thate06g01130, gene.Thate07g15150, gene.Thate07g16180 ... |