Basic Information
Locus ID:
gene.Thate05g25710
Species & Taxonomic ID:
Thalassia testudinum & 55497
Genome Assembly:
GCA_037157565.1
Description:
Belongs to the universal ribosomal protein uS3 family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Chr05 | 420509891 | 420524663 | + | gene.Thate05g25710 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.53 | 18,752.17 Da | 33.27 | 73.81 | -0.28 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| SUPERFAMILY | SSF54821 | Ribosomal protein S3 C-terminal domain | 121 | 165 | 8.89E-9 | IPR036419 |
| SUPERFAMILY | SSF54814 | Prokaryotic type KH domain (KH-domain type II) | 87 | 126 | 3.14E-6 | IPR009019 |
| Gene3D | G3DSA:3.30.1140.32 | - | 120 | 168 | 8.0E-19 | IPR036419 |
| Gene3D | G3DSA:3.30.300.20 | - | 85 | 119 | 2.2E-11 | IPR015946 |
Gene Ontology
Molecular Function:
KEGG Pathway
Pathway:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G53870.1 | Ribosomal protein S3 family protein. | 0 |
| RefSeq | XP_031484594.1 | 40S ribosomal protein S3-3 [Nymphaea colorata] | 0 |
| Q9M339 | Small ribosomal subunit protein uS3y OS=Arabidopsis thaliana OX=3702 GN=RPS3B PE=1 SV=1 | 0 | |
| TrEMBL | A0A6V7PN79 | KH type-2 domain-containing protein OS=Ananas comosus var. bracteatus OX=296719 GN=CB5_LOCUS15525 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology