Basic Information
Locus ID:
gene.Thate05g23890
Species & Taxonomic ID:
Thalassia testudinum & 55497
Genome Assembly:
GCA_037157565.1
Description:
Belongs to the glycosyl hydrolase 17 family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Chr05 | 324681364 | 324686287 | - | gene.Thate05g23890 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.09 | 53,392.11 Da | 33.71 | 93.24 | 0.20 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF07983 | X8 domain | 360 | 430 | 3.1E-18 | IPR012946 |
| Pfam | PF00332 | Glycosyl hydrolases family 17 | 23 | 343 | 1.8E-82 | IPR000490 |
| SUPERFAMILY | SSF51445 | (Trans)glycosidases | 23 | 343 | 1.5E-86 | IPR017853 |
| Gene3D | G3DSA:3.20.20.80 | Glycosidases | 22 | 348 | 4.2E-117 | - |
| Gene3D | G3DSA:1.20.58.1040 | - | 353 | 454 | 1.5E-9 | - |
| SMART | SM00768 | X8_cls | 359 | 444 | 4.0E-46 | IPR012946 |
| ProSitePatterns | PS00587 | Glycosyl hydrolases family 17 signature. | 257 | 270 | - | IPR000490 |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G01630.1 | O-Glycosyl hydrolases family 17 protein. | 0 |
| RefSeq | XP_039114553.1 | glucan endo-1,3-beta-glucosidase 3-like [Dioscorea cayenensis subsp. rotundata] | 0 |
| Q9ZU91 | Glucan endo-1,3-beta-glucosidase 3 OS=Arabidopsis thaliana OX=3702 GN=At2g01630 PE=2 SV=2 | 0 | |
| TrEMBL | A0A1D1Y1L6 | Glucan endo-1,3-beta-glucosidase 2 OS=Anthurium amnicola OX=1678845 GN=At1g66250 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology