Basic Information
Locus ID:
gene.Thate05g23790
Species & Taxonomic ID:
Thalassia testudinum & 55497
Genome Assembly:
GCA_037157565.1
Description:
F-Box protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Chr05 | 323141403 | 323162491 | - | gene.Thate05g23790 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.75 | 35,759.13 Da | 47.69 | 91.27 | -0.28 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF12937 | F-box-like | 23 | 65 | 6.2E-6 | IPR001810 |
| SUPERFAMILY | SSF81383 | F-box domain | 23 | 66 | 1.41E-7 | IPR036047 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 31 | 198 | 5.2E-8 | IPR032675 |
| ProSitePatterns | PS00198 | 4Fe-4S ferredoxin-type iron-sulfur binding region signature. | 231 | 242 | - | IPR017900 |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G01620.1 | RNI-like superfamily protein. | 0 |
| RefSeq | XP_039145379.1 | F-box protein SKIP28 [Dioscorea cayenensis subsp. rotundata] | 0 |
| Q9ZU90 | F-box protein SKIP28 OS=Arabidopsis thaliana OX=3702 GN=SKIP28 PE=1 SV=1 | 0 | |
| TrEMBL | A0A8B7CYW2 | F-box protein SKIP28 OS=Phoenix dactylifera OX=42345 GN=LOC103721133 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology