Basic Information
Locus ID:
gene.Thate05g22130
Species & Taxonomic ID:
Thalassia testudinum & 55497
Genome Assembly:
GCA_037157565.1
Description:
Belongs to the glycosyl hydrolase 17 family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Chr05 | 275988140 | 276071923 | + | gene.Thate05g22130 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.38 | 69,339.73 Da | 48.51 | 86.45 | -0.04 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00332 | Glycosyl hydrolases family 17 | 155 | 481 | 4.5E-66 | IPR000490 |
| Pfam | PF07983 | X8 domain | 499 | 571 | 2.4E-19 | IPR012946 |
| SUPERFAMILY | SSF51445 | (Trans)glycosidases | 155 | 481 | 5.94E-70 | IPR017853 |
| Gene3D | G3DSA:1.20.58.1040 | - | 492 | 599 | 6.6E-11 | - |
| Gene3D | G3DSA:3.20.20.80 | Glycosidases | 154 | 487 | 9.3E-97 | - |
| SMART | SM00768 | X8_cls | 498 | 584 | 2.8E-47 | IPR012946 |
| ProSitePatterns | PS00587 | Glycosyl hydrolases family 17 signature. | 394 | 407 | - | IPR000490 |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G11820.2 | O-Glycosyl hydrolases family 17 protein. | 0 |
| RefSeq | XP_039140290.1 | glucan endo-1,3-beta-glucosidase 1-like isoform X1 [Dioscorea cayenensis subsp. rotundata] | 0 |
| O65399 | Glucan endo-1,3-beta-glucosidase 1 OS=Arabidopsis thaliana OX=3702 GN=At1g11820 PE=2 SV=3 | 0 | |
| TrEMBL | A0A0K9Q3M0 | Beta-1,3-endoglucanase, family GH17 OS=Zostera marina OX=29655 GN=ZOSMA_10G00420 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology