Basic Information
Locus ID:
gene.Thate05g20180
Species & Taxonomic ID:
Thalassia testudinum & 55497
Genome Assembly:
GCA_037157565.1
Description:
LRR receptor-like serine threonine-protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Chr05 | 199298389 | 199473311 | - | gene.Thate05g20180 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.10 | 102,419.29 Da | 38.98 | 90.15 | -0.12 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF11721 | Malectin domain | 475 | 661 | 1.8E-43 | IPR021720 |
| Pfam | PF00069 | Protein kinase domain | 750 | 909 | 3.1E-32 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 726 | 911 | 2.87E-55 | IPR011009 |
| SUPERFAMILY | SSF52058 | L domain-like | 148 | 436 | 7.82E-50 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 248 | 462 | 1.2E-45 | IPR032675 |
| Gene3D | G3DSA:2.60.120.430 | - | 475 | 666 | 4.1E-37 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 144 | 247 | 1.4E-27 | IPR032675 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 718 | 822 | 1.4E-34 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 823 | 917 | 3.7E-24 | - |
| SMART | SM00220 | serkin_6 | 747 | 925 | 9.7E-9 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 747 | 928 | 28.993793 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 867 | 879 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 753 | 775 | - | IPR017441 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G56140.1 | Leucine-rich repeat transmembrane protein kinase. | 0 |
| RefSeq | XP_038970403.1 | probable LRR receptor-like serine/threonine-protein kinase At1g56140 [Phoenix dactylifera] | 0 |
| C0LGH3 | Probable LRR receptor-like serine/threonine-protein kinase At1g56140 OS=Arabidopsis thaliana OX=3702 GN=At1g56140 PE=2 SV=2 | 0 | |
| TrEMBL | A0A8B8ZG47 | probable LRR receptor-like serine/threonine-protein kinase At1g56140 OS=Phoenix dactylifera OX=42345 GN=LOC103722528 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology