Basic Information
Locus ID:
gene.Thate05g20170
Species & Taxonomic ID:
Thalassia testudinum & 55497
Genome Assembly:
GCA_037157565.1
Description:
LRR receptor-like serine threonine-protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Chr05 | 198648277 | 198770626 | + | gene.Thate05g20170 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.04 | 115,730.09 Da | 42.10 | 88.28 | -0.21 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 718 | 980 | 5.25751E-97 | - |
| Pfam | PF11721 | Malectin domain | 441 | 628 | 4.7E-43 | IPR021720 |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 716 | 979 | 1.2E-45 | IPR001245 |
| Pfam | PF13855 | Leucine rich repeat | 329 | 387 | 1.2E-7 | IPR001611 |
| SUPERFAMILY | SSF52058 | L domain-like | 101 | 416 | 2.45E-51 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 696 | 980 | 1.48E-79 | IPR011009 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 292 | 419 | 1.9E-20 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 60 | 291 | 9.4E-50 | IPR032675 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 675 | 787 | 4.6E-34 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 788 | 991 | 3.9E-59 | - |
| Gene3D | G3DSA:2.60.120.430 | - | 440 | 633 | 1.1E-33 | - |
| SMART | SM00220 | serkin_6 | 712 | 980 | 7.1E-34 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 712 | 995 | 37.71447 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 718 | 740 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 832 | 844 | - | IPR008271 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G56120.3 | - | 0 |
| RefSeq | XP_019710848.1 | probable LRR receptor-like serine/threonine-protein kinase At1g56140 isoform X2 [Elaeis guineensis] | 0 |
| C0LGH3 | Probable LRR receptor-like serine/threonine-protein kinase At1g56140 OS=Arabidopsis thaliana OX=3702 GN=At1g56140 PE=2 SV=2 | 0 | |
| TrEMBL | A0A835RZV0 | Protein kinase domain-containing protein OS=Vanilla planifolia OX=51239 GN=HPP92_005591 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology