Basic Information
Locus ID:
gene.Thate05g20130
Species & Taxonomic ID:
Thalassia testudinum & 55497
Genome Assembly:
GCA_037157565.1
Description:
LRR receptor-like serine threonine-protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Chr05 | 198229866 | 198279362 | - | gene.Thate05g20130 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.20 | 109,322.47 Da | 34.69 | 91.31 | -0.12 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 675 | 937 | 7.77889E-93 | - |
| Pfam | PF13855 | Leucine rich repeat | 282 | 340 | 7.0E-10 | IPR001611 |
| Pfam | PF11721 | Malectin domain | 413 | 594 | 2.7E-35 | IPR021720 |
| Pfam | PF00069 | Protein kinase domain | 672 | 875 | 7.5E-44 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 653 | 959 | 5.66E-77 | IPR011009 |
| SUPERFAMILY | SSF52058 | L domain-like | 77 | 346 | 3.33E-50 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 272 | 400 | 4.9E-25 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 34 | 271 | 2.0E-52 | IPR032675 |
| Gene3D | G3DSA:2.60.120.430 | - | 409 | 601 | 8.5E-30 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 644 | 744 | 1.6E-33 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 745 | 949 | 4.0E-55 | - |
| SMART | SM00220 | serkin_6 | 669 | 944 | 1.2E-28 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 669 | 944 | 34.251644 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 675 | 698 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 789 | 801 | - | IPR008271 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G56130.3 | - | 0 |
| RefSeq | XP_017648758.1 | PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At1g56140 [Gossypium arboreum] | 0 |
| C0LGH3 | Probable LRR receptor-like serine/threonine-protein kinase At1g56140 OS=Arabidopsis thaliana OX=3702 GN=At1g56140 PE=2 SV=2 | 0 | |
| TrEMBL | A0A5J5PME0 | Protein kinase domain-containing protein OS=Gossypium barbadense OX=3634 GN=ES319_D10G051600v1 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology