Basic Information
Locus ID:
gene.Thate05g20090
Species & Taxonomic ID:
Thalassia testudinum & 55497
Genome Assembly:
GCA_037157565.1
Description:
LRR receptor-like serine threonine-protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Chr05 | 197712304 | 197871578 | - | gene.Thate05g20090 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.97 | 106,717.59 Da | 31.86 | 90.42 | -0.12 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 652 | 915 | 2.09241E-94 | - |
| Pfam | PF11721 | Malectin domain | 389 | 570 | 1.7E-34 | IPR021720 |
| Pfam | PF13855 | Leucine rich repeat | 258 | 316 | 1.7E-10 | IPR001611 |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 650 | 915 | 7.3E-48 | IPR001245 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 630 | 934 | 9.85E-81 | IPR011009 |
| SUPERFAMILY | SSF52058 | L domain-like | 67 | 339 | 6.97E-50 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 249 | 373 | 3.6E-25 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 35 | 248 | 1.2E-44 | IPR032675 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 619 | 721 | 4.8E-33 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 722 | 927 | 1.8E-58 | - |
| Gene3D | G3DSA:2.60.120.430 | - | 385 | 575 | 4.5E-27 | - |
| SMART | SM00220 | serkin_6 | 646 | 922 | 5.8E-30 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 646 | 922 | 36.286938 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 766 | 778 | - | IPR008271 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G56140.1 | Leucine-rich repeat transmembrane protein kinase. | 0 |
| RefSeq | XP_029116218.1 | probable LRR receptor-like serine/threonine-protein kinase At1g56140 isoform X3 [Elaeis guineensis] | 0 |
| C0LGH3 | Probable LRR receptor-like serine/threonine-protein kinase At1g56140 OS=Arabidopsis thaliana OX=3702 GN=At1g56140 PE=2 SV=2 | 0 | |
| TrEMBL | A0A8N4IC35 | probable LRR receptor-like serine/threonine-protein kinase At1g56140 isoform X3 OS=Elaeis guineensis var. tenera OX=51953 GN=LOC105059842 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology