Basic Information
Locus ID:
gene.Thate05g20080
Species & Taxonomic ID:
Thalassia testudinum & 55497
Genome Assembly:
GCA_037157565.1
Description:
Belongs to the protein kinase superfamily
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Chr05 | 196823796 | 196964589 | + | gene.Thate05g20080 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.64 | 111,650.89 Da | 33.42 | 90.88 | -0.15 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 694 | 956 | 7.80335E-94 | - |
| Pfam | PF00560 | Leucine Rich Repeat | 318 | 337 | 0.11 | IPR001611 |
| Pfam | PF00560 | Leucine Rich Repeat | 152 | 173 | 1.5 | IPR001611 |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 690 | 956 | 4.0E-46 | IPR001245 |
| Pfam | PF11721 | Malectin domain | 427 | 608 | 1.3E-35 | IPR021720 |
| SUPERFAMILY | SSF52058 | L domain-like | 100 | 389 | 1.7E-52 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 669 | 956 | 5.06E-80 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 658 | 763 | 2.6E-36 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 764 | 971 | 5.6E-58 | - |
| Gene3D | G3DSA:2.60.120.430 | - | 423 | 637 | 9.1E-27 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 279 | 395 | 1.0E-21 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 38 | 278 | 2.2E-51 | IPR032675 |
| SMART | SM00220 | serkin_6 | 688 | 957 | 2.5E-31 | IPR000719 |
| SMART | SM00369 | LRR_typ_2 | 221 | 245 | 190.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 125 | 148 | 160.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 340 | 364 | 30.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 149 | 173 | 17.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 197 | 220 | 34.0 | IPR003591 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 688 | 966 | 36.838165 | IPR000719 |
| ProSiteProfiles | PS51450 | Leucine-rich repeat profile. | 318 | 340 | 7.519437 | IPR001611 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 808 | 820 | - | IPR008271 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 995 | 1014 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G56120.2 | - | 0 |
| RefSeq | XP_042510118.1 | probable LRR receptor-like serine/threonine-protein kinase At1g56140 isoform X1 [Macadamia integrifolia] | 0 |
| C0LGH3 | Probable LRR receptor-like serine/threonine-protein kinase At1g56140 OS=Arabidopsis thaliana OX=3702 GN=At1g56140 PE=2 SV=2 | 0 | |
| TrEMBL | A0A835VDM8 | Protein kinase domain-containing protein OS=Vanilla planifolia OX=51239 GN=HPP92_005934 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology