halophFGD

Basic Information

Locus ID: gene.Thate05g13670

Species & Taxonomic ID: Thalassia testudinum & 55497

Genome Assembly: GCA_037157565.1

Description: Belongs to the adaptor complexes medium subunit family

Maps and Mapping Data

Chromosome	Start	End	Strand	ID
Chr05	94511789	94512415	-	gene.Thate05g13670

Protein Data

Protein Properties:

Theoretical pI	Molecular Weight	Instability Index	Aliphatic Index	GRAVY
5.03	17,797.60 Da	56.82	66.70	-0.30

Protein Domain:

Category	ID	Description	Start	End	Evalue/Score	InterPro ID
MobiDBLite	mobidb-lite	consensus disorder prediction	51	93	-	-
MobiDBLite	mobidb-lite	consensus disorder prediction	1	19	-	-
MobiDBLite	mobidb-lite	consensus disorder prediction	1	99	-	-

KEGG Pathway

KO Term:

K10875 (DNA repair and recombination protein RAD54 and RAD54-like protein [EC:5.6.2.-])

Pathway:

ko03440 (Homologous recombination) map03440 (Homologous recombination)

Best hit

Source	Best Hit ID	Description	E-value
RefSeq	XP_042501825.1	uncharacterized protein LOC122079430 [Macadamia integrifolia]	0
TrEMBL	A0A1D1Y961	SH3-containing GRB2-like protein 3-interacting protein 1 OS=Anthurium amnicola OX=1678845 GN=SGIP1_1 PE=4 SV=1	0

Expression

BioProject	Accession	TPM	Cultivar	Tissue	Development Stage	Sample Name	Description
No sample metadata found.

Network

No network data available for this species.

Orthology

Family	Species	Count	Orthologous Genes
Hydrocharitaceae	Thalassia testudinum	14	gene.Thate02g30180, gene.Thate03g08470, gene.Thate04g16600 ... gene.Thate04g28040, gene.Thate04g28050, gene.Thate05g13670, gene.Thate05g17870, gene.Thate05g22830, gene.Thate05g27380, gene.Thate06g11940, gene.Thate06g11960, gene.Thate07g02280, gene.Thate08g24690, gene.Thate09g07300