Basic Information
Locus ID:
gene.Thate05g11720
Species & Taxonomic ID:
Thalassia testudinum & 55497
Genome Assembly:
GCA_037157565.1
Description:
Transcription factor
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Chr05 | 72397420 | 72399369 | + | gene.Thate05g11720 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.48 | 70,033.07 Da | 54.56 | 68.01 | -0.49 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd11449 | bHLH_AtAIB_like | 447 | 520 | 1.0375E-46 | - |
| Pfam | PF00010 | Helix-loop-helix DNA-binding domain | 454 | 499 | 3.0E-11 | IPR011598 |
| Pfam | PF14215 | bHLH-MYC and R2R3-MYB transcription factors N-terminal | 73 | 263 | 1.8E-49 | IPR025610 |
| SUPERFAMILY | SSF47459 | HLH, helix-loop-helix DNA-binding domain | 453 | 521 | 4.19E-19 | IPR036638 |
| Gene3D | G3DSA:4.10.280.10 | - | 443 | 529 | 1.1E-17 | IPR036638 |
| SMART | SM00353 | finulus | 456 | 505 | 6.0E-17 | IPR011598 |
| ProSiteProfiles | PS50888 | Myc-type, basic helix-loop-helix (bHLH) domain profile. | 450 | 499 | 17.402662 | IPR011598 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 399 | 418 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 393 | 458 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 293 | 321 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 503 | 529 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 429 | 458 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 24 | 49 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 503 | 556 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 532 | 555 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 30 | 49 | - | - |
| Coils | Coil | Coil | 496 | 530 | - | - |
Gene Ontology
Molecular Function:
KEGG Pathway
KO Term:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G32640.1 | Basic helix-loop-helix (bHLH) DNA-binding family protein. Encodes a MYC-related transcriptional activator with a typical DNA binding domain of a basic helix-loop-helix leucine zipper motif. Binds to an extended G-Box promoter motif. Its transcription is induced by dehydration stress and ABA treatment. Negative regulator of blue lightmediated photomorphogenic growth and blue and far-red-lightregulated gene expression. Positive regulator of lateral root formation. Regulates diverse JA-dependent functions. Negatively regulates Trp metabolism and biosynthesis of Trp-derived secondary metabolites. Positively regulates flavonoid biosynthesis, resistance to insects, and response to oxidative stress. Regulates other transcription factors, and negatively regulates its own expression. | 0 |
| RefSeq | XP_034709230.1 | transcription factor MYC2-like [Vitis riparia] | 0 |
| A0A3Q7HRZ6 | Transcription factor MYC2 OS=Solanum lycopersicum OX=4081 GN=MYC2 PE=1 SV=1 | 0 | |
| TrEMBL | A0A438EQS2 | Transcription factor MYC2 OS=Vitis vinifera OX=29760 GN=MYC2_1 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology