Basic Information
Locus ID:
gene.Thate05g06230
Species & Taxonomic ID:
Thalassia testudinum & 55497
Genome Assembly:
GCA_037157565.1
Description:
isoform X1
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Chr05 | 35135421 | 35166993 | - | gene.Thate05g06230 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.94 | 106,394.03 Da | 50.86 | 80.77 | -0.61 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd04508 | TUDOR | 749 | 792 | 0.00401459 | IPR002999 |
| SUPERFAMILY | SSF63748 | Tudor/PWWP/MBT | 746 | 786 | 7.52E-6 | - |
| SUPERFAMILY | SSF48371 | ARM repeat | 34 | 232 | 1.2E-7 | IPR016024 |
| Gene3D | G3DSA:2.30.30.140 | - | 742 | 795 | 1.1E-10 | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 859 | 958 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 909 | 934 | - | - |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G31880.2 | 0 | |
| RefSeq | XP_008799642.2 | uncharacterized protein LOC103714235 isoform X1 [Phoenix dactylifera] | 0 |
| Q8GUP3 | Sister chromatid cohesion protein PDS5 homolog C OS=Arabidopsis thaliana OX=3702 GN=PDS5C PE=1 SV=1 | 0 | |
| TrEMBL | A0A8B7CIG5 | uncharacterized protein LOC103714235 isoform X1 OS=Phoenix dactylifera OX=42345 GN=LOC103714235 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology