Basic Information
Locus ID:
gene.Thate05g03540
Species & Taxonomic ID:
Thalassia testudinum & 55497
Genome Assembly:
GCA_037157565.1
Description:
Belongs to the NPH3 family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Chr05 | 18844127 | 18851270 | - | gene.Thate05g03540 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.99 | 70,653.00 Da | 49.38 | 93.70 | -0.09 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00651 | BTB/POZ domain | 27 | 115 | 2.3E-7 | IPR000210 |
| Pfam | PF03000 | NPH3 family | 213 | 477 | 1.3E-83 | IPR027356 |
| SUPERFAMILY | SSF54695 | POZ domain | 15 | 130 | 9.94E-18 | IPR011333 |
| Gene3D | G3DSA:3.30.710.10 | Potassium Channel Kv1.1; Chain A | 5 | 136 | 5.2E-13 | IPR011333 |
| SMART | SM00225 | BTB_4 | 28 | 134 | 0.0032 | IPR000210 |
| ProSiteProfiles | PS50097 | BTB domain profile. | 28 | 98 | 10.59223 | IPR000210 |
| ProSiteProfiles | PS51649 | NPH3 domain profile. | 213 | 501 | 86.187729 | IPR027356 |
| Coils | Coil | Coil | 543 | 577 | - | - |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G30440.1 | Phototropic-responsive NPH3 family protein. | 0 |
| RefSeq | XP_050223426.1 | BTB/POZ domain-containing protein At1g30440 [Mercurialis annua] | 0 |
| Q9S9Q9 | BTB/POZ domain-containing protein At1g30440 OS=Arabidopsis thaliana OX=3702 GN=At1g30440 PE=1 SV=2 | 0 | |
| TrEMBL | A0A6A6MXJ5 | NPH3 domain-containing protein OS=Hevea brasiliensis OX=3981 GN=GH714_041183 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology